LOCUS BC056898 3122 bp mRNA linear HUM 19-JAN-2018 DEFINITION Homo sapiens plastin 3 (T isoform), mRNA (cDNA clone MGC:65051 IMAGE:6064540), complete cds. ACCESSION BC056898 VERSION BC056898.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3122) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3122) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov REFERENCE 3 (bases 1 to 3122) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-JAN-2018) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK Sequence update by database staff to remove vector contamination COMMENT On Jan 19, 2018 this sequence version replaced BC056898.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 119 Row: k Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 28416938. FEATURES Location/Qualifiers source 1..3122 /db_xref="H-InvDB:HIT000259623" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:65051 IMAGE:6064540" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3122 /gene="PLS3" /gene_synonym="T-PLASTIN" /db_xref="GeneID:5358" /db_xref="HGNC:HGNC:9091" /db_xref="MIM:300131" CDS 105..1997 /gene="PLS3" /gene_synonym="T-PLASTIN" /codon_start=1 /product="plastin 3 (T isoform)" /protein_id="AAH56898.1" /db_xref="GeneID:5358" /db_xref="HGNC:HGNC:9091" /db_xref="MIM:300131" /translation="MDEMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEA NMPLPGYKVREIIQKLMLDGDRNKDGKISFDEFVYIFQEVKSSDIAKTFRKAINRKEG ICALGGTSELSSEGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAV GDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAED LRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRW ANFHLENSGWQKINNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDL KRAESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTL LEGETREERTFRNWMNSLGVNPHVNHLYADLQDALVILQLYERIKVPVDWSKVNKPPY PKLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQLMRRYTLN VLEDLGDGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGC INYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMG RGMKRV" BASE COUNT 972 a 566 c 662 g 922 t ORIGIN 1 tttagagcca cagctgcaaa gattccgagg tgcagaagtt gtctgagtgc gttggtcggc 61 ggcagtcggg ccagacccag gactctgcga ctttacatct ttaaatggat gagatggcta 121 ccactcagat ttccaaagat gagcttgatg aactcaaaga ggcctttgca aaagttgatc 181 tcaacagcaa cggattcatt tgtgactatg aacttcatga gctcttcaag gaagctaata 241 tgccattacc aggatataaa gtgagagaaa ttattcagaa actcatgctg gatggtgaca 301 ggaataaaga tgggaaaata agttttgacg aatttgttta tatttttcaa gaggtaaaaa 361 gtagtgatat tgccaagacc ttccgcaaag caatcaacag gaaagaaggt atttgtgctc 421 tgggtggaac ttcagagttg tccagcgaag gaacacagca ttcttactca gaggaagaaa 481 aatatgcttt tgttaactgg ataaacaaag ctttggaaaa tgatcctgat tgtagacatg 541 ttataccaat gaaccctaac accgatgacc tgttcaaagc tgttggtgat ggaattgtgc 601 tttgtaaaat gattaacctt tcagttcctg ataccattga tgaaagagca atcaacaaga 661 agaaacttac acccttcatc attcaggaaa acttgaactt ggcactgaac tctgcttctg 721 ccattgggtg tcatgttgtg aacattggtg cagaagattt gagggctggg aaacctcatc 781 tggttttggg actgctttgg cagatcatta agatcggttt gttcgctgac attgaattaa 841 gcaggaatga agccttggct gctttactcc gagatggtga gactttggag gaacttatga 901 aattgtctcc agaagagctt ctgcttagat gggcaaactt tcatttggaa aactcgggct 961 ggcaaaaaat taacaacttt agtgctgaca tcaaggattc caaagcctat ttccatcttc 1021 tcaatcaaat cgcaccaaaa ggacaaaagg aaggtgaacc acggatagat attaacatgt 1081 caggtttcaa tgaaacagat gatttgaaga gagctgagag tatgcttcaa caagcagata 1141 aattaggttg cagacagttt gttacccctg ctgatgttgt cagtggaaac cccaaactca 1201 acttagcttt cgtggctaac ctgtttaata aatacccagc actaactaag ccagagaacc 1261 aggatattga ctggactcta ttagaaggag aaactcgtga agaaagaacc ttccgtaact 1321 ggatgaactc tcttggtgtc aatcctcacg taaaccatct ctatgctgac ctgcaagatg 1381 ccctggtaat cttacagtta tatgaacgaa ttaaagttcc tgttgactgg agtaaggtta 1441 ataaacctcc atacccgaaa ctgggagcca acatgaaaaa gctagaaaac tgcaactatg 1501 ctgttgaatt agggaagcat cctgctaaat tctccctggt tggcattgga gggcaagacc 1561 tgaatgatgg gaaccaaacc ctgactttag ctttagtctg gcagctgatg agaagatata 1621 ccctcaatgt cctggaagat cttggagatg gtcagaaagc caatgacgac atcattgtga 1681 actgggtgaa cagaacgttg agtgaagctg gaaaatcaac ttccattcag agttttaagg 1741 acaagacgat cagctccagt ttggcagttg tggatttaat tgatgccatc cagccaggct 1801 gtataaacta tgaccttgtg aagagtggca atctaacaga agatgacaag cacaataatg 1861 ccaagtatgc agtgtcaatg gctagaagaa tcggagccag agtgtatgct ctccctgaag 1921 accttgtgga agtaaagccc aagatggtca tgactgtgtt tgcatgtttg atgggcaggg 1981 gaatgaagag agtgtaaaat aaccaatctg aataaaacag ccatgctccc aggtgcatga 2041 ttcgcaggtc agctatttcc aggtgaagtg cttatggctt aaggaactct tggccattca 2101 aaggactttt cattttgatt aacaggacta gcttatcatg agagccctca ggggaaaggg 2161 tttaagaaaa acaactcctc tttcccatag tcagagttga atttgtcagg cacgcctgaa 2221 atgtgctcat agccaaaaca ttttactctc tcctcctaga atgctgccct tgacatttcc 2281 cattgctgta tgttatttct tgctctgtta tcttttgccc tcttagaatg tccctctctt 2341 gggacttgct tagatgatgg gatatgaata ttattagaca gtaattttgc tttccatcca 2401 gtatgctagt tcttattcga gaactatggt cagagcgtat ttggatatga gtatcctttg 2461 cttatctttg tagtactgaa aatttgccga agtaactggc tgtgcagaat gtaatagaag 2521 cttttcttat tcttttattc ttaagatcag tatcttttta cagtattctt tctacatgat 2581 ccttttttgt acatttaaga atattttgat tatattaaac aagactgctg attttgctac 2641 tttttttaag gggtcttcaa gtaagtaaaa catacatcgt agctagaaga aaaatgtacc 2701 ttaaatttgc atcttccctc tcatacccaa gctgtaaaca attgaaatat tttgtcttaa 2761 atcacttggt tcaatacatg cttatttgtt ttaaaacctg tatcatcaaa ctctctctct 2821 aaatttaaaa tgctgttgaa tatgatactt ttgaggagag agtgtgctca gaacttagac 2881 gggatttggt aggccaagta tgctaagtgt acaatatatt ttttaatttt acacctgaaa 2941 caaagaaatg tggtcactaa aaataaaagt atatatgtag gaattaatgt actcttgctt 3001 tgtcaagctg tttgctatag tttccaaggt attatgttac tctaactctg aaaagtgatg 3061 taatctggta gcaatgtagt agttcaaata aaggcattta cataataaaa aaaaaaaaaa 3121 aa //