LOCUS BC054115 2835 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 213, mRNA (cDNA clone
MGC:51339 IMAGE:5270027), complete cds.
ACCESSION BC054115
VERSION BC054115.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2835)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2835)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57232751.
FEATURES Location/Qualifiers
source 1..2835
/db_xref="H-InvDB:HIT000259428"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51339 IMAGE:5270027"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2835
/gene="C1orf213"
/gene_synonym="FLJ90508"
/db_xref="GeneID:148898"
/db_xref="HGNC:HGNC:25122"
CDS 332..712
/gene="C1orf213"
/gene_synonym="FLJ90508"
/codon_start=1
/product="chromosome 1 open reading frame 213"
/protein_id="AAH54115.1"
/db_xref="GeneID:148898"
/db_xref="HGNC:HGNC:25122"
/translation="MLAVPVRLKVGSRKPEWGTNRLTSCPAKDPLDRRLQNLRDRERV
PEPQRSLRPGVQEDSREHGQVPEVSDPQVDLEFVDLQAKPRYRRLILKTQIPEASDSQ
AAQKPQAHRQIPETTEAGQETTSN"
BASE COUNT 670 a 685 c 791 g 689 t
ORIGIN
1 gcgtctcggg agtgcggtcg gcagtagagc ctggcggtgt cttggcttcg gcgctttaac
61 cctgtagggg cgtgcgactg cgtccttctc aagggggcgc ccctcgagcg gcgggctgag
121 tggcgtccag cggcggggag gcgaaaaccc tgggggactc agaagcgggt ggcggtgtag
181 ggcgtgtaag gaggagatag ccaggcccct gcgggggggg cgggccctcc ttagcgtccc
241 agagggcttg tctgctacag gggctcccag cggcctcccg caccgaaggg accctgggcg
301 tctgaggccc tgatccgggc gggccttcag gatgttagca gtccctgtcc ggttgaaggt
361 aggaagccga aaacccgagt gggggacgaa cagacttacc tcctgtcccg caaaagatcc
421 actagatcgt cgtctccaaa acctgagaga ccgcgaacgg gttccagagc cgcagcgttc
481 tctcagacct ggcgttcagg aagattctag agagcacggg caggtcccgg aggtctcaga
541 cccgcaggta gatctcgaat tcgtagactt gcaggcgaag cccagatatc gtaggctgat
601 cctaaagact cagattcccg aggcctcaga ctcgcaggca gctcagaaac cacaggctca
661 taggcagatc cctgagacca cagaggctgg ccaagaaacc accagcaact aagctgcatt
721 cagctggagt tcctcggaac gggaggactc gcagctctcc ctttccccag ccaggatgag
781 ggaattagac aatggaagtc gagcactggg gaaagcaggc attctgcgtg gggaagagct
841 cccagctcgc tgtagccttg gagagggaag tgatggaaaa agaatatagc agcttattag
901 ggactcccac cctcttcaag ttataaatat ccccagaacc ttggctacgt gcccggaagc
961 ctgttgtctc taactgtaca ggagacttct ctgcctgggc tgggaaaggg gcctttcttt
1021 tgttttgcag atagatccac ccactgagga acttgaaaat ttttttcaaa cataactcca
1081 ggccttgctt ttattagtga gtgtcctgtt cccagtgccc ggttatttat gattaaatta
1141 ctgaagtgtc taaaaagaac agaaggaccc accccagcca taatgcagac tttcccattc
1201 cttctctttc cacccgcaac tgtggggcta agaattctta agatgtcaca gaattatacc
1261 atcctacctc atctaaagtc gatccgaggc tggtccgatg gtagtgggtt accagaactt
1321 aataacatta ataactctaa agttagtata caacccccca ctgctaaatt tggctataaa
1381 aataaaattg atctgagcac catataaaat ggaatcctgg agggtcccct agaggcagta
1441 tccccagtgg aaagagcgtg ggcctcaagg tcagacaagc ctggtttgga atccaggctg
1501 tgtatccttt ggaaagtcat tgaatccagg cccatttcct tttctctaaa atgagggtca
1561 tcatacctaa ggatgttgtg aggcgtgagt gagatgatta aagcgttcca gagagtgcgc
1621 tcttggatga tagccgttac tttttattaa ccctggcttt ggtggtaagg gaaacttcca
1681 gaaatgcttg tgggtatatt ggatagctca gaaaatctgg gaaatcaaag tggctcaata
1741 gctgtgagga actgtgggtg actttatcct cacatcgtgt ttcttccaga aattcagacg
1801 caacagaggt taggccagtt tggtgggttc cagtgagcgg tgtgttgagc ctagtagagc
1861 ataggtactt ggggttgcca aaaccccagc aagttgaggc ttcacgctca gggaaacttc
1921 tgggtcagag gttaataacc acgctccttg gagcaaggag gaggggagcc tttctgacta
1981 gctgaagtaa ttgcaggttt ctaactgggc ctaaggtgag ctgagggctt gagcccctca
2041 gcccagcggg ggtccctttt catcccttct ctgacagatt gctttgtaaa ctttcttagg
2101 ccttcccccc acccctttgc cccagtgctt taagcccttc tttgtcttct tgctgtttct
2161 tttattcctc aggcctgcgg ggcgggggcg gggtggcgcc caggacgact ccccgggctc
2221 agcttggctg cctgcctcct tctgtaagtg cttttttttt cttcacctgg gaccctctag
2281 aggttggaaa gagaagagag gctgggagcg gatggaaagc atgactgcat ctggagcccc
2341 tggggggagt ggggaagagg gagtggaagg acagtggctg aggggcttcc tgttgcagcc
2401 ttcagctgga ctcagggttg gggtcactgg aggaggaggt ggcttcctgc cccattgttc
2461 tggactgcag tgtttcttgg gaatacttac tgtatgtgga ttttcagtaa ccaacttgga
2521 aagctgtatt tgttcccatg attcagcaaa caatgagtac ctactgtgtg tagaagcagc
2581 aggacagcct gtcatcactg ggaaagaggc cagaagagcc gtttggccag ggtctccaat
2641 ttaggctttc aacattatct ctaaagaagg ttatacatta tgtcggctcc actggctgat
2701 gggatcaaag accctccttg tatatcctta aacctgtact ctattaccag gccactgtgc
2761 ctgtggagca ctgtaagttc ctacctttta ataaatttta taattatctt gtgagcagca
2821 aaaaaaaaaa aaaaa
//