LOCUS BC052311 2134 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PR domain containing 14, mRNA (cDNA clone MGC:59730
IMAGE:6671984), complete cds.
ACCESSION BC052311
VERSION BC052311.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2134)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2134)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41349468.
FEATURES Location/Qualifiers
source 1..2134
/db_xref="H-InvDB:HIT000053781"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59730 IMAGE:6671984"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2134
/gene="PRDM14"
/gene_synonym="MGC59730"
/gene_synonym="PFM11"
/db_xref="GeneID:63978"
/db_xref="HGNC:HGNC:14001"
CDS 116..1831
/gene="PRDM14"
/gene_synonym="MGC59730"
/gene_synonym="PFM11"
/codon_start=1
/product="PR domain containing 14"
/protein_id="AAH52311.1"
/db_xref="GeneID:63978"
/db_xref="HGNC:HGNC:14001"
/translation="MALPRPSEAVPQDKVCYPPESSPQNLAAYYTPFPSYGHYRNSLA
TVEEDFQPFRQLEAAASAAPAMPPFPFRMAPPLLSPGLGLQREPLYDLPWYSKLPPWY
PIPHVPREVPPFLSSSHEYAGASSEDLGHQIIGGDNESGPCCGPDTLIPPPPADASLL
PEGLRTSQLLPCSPSKQSEDGPKPSNQEGKSPARFQFTEEDLHFVLYGVTPSLEHPAS
LHHAISGLLVPPDSSGSDSLPQTLDEDSLQLPEGLCLMQTVFGEVPHFGVFCSSFIAK
GVRFGPFQGKVVNASEVKTYGDNSVMWEIFEDGHLSHFIDGKGGTGNWMSYVNCARFP
KEQNLVAVQCQGHIFYESCKEIHQNQELLVWYGDCYEKFLDIPVSLQVTEPGKQPSGP
SEESAEGYRCERCGKVFTYKYYRDKHLKYTPCVDKGDRKFPCSLCKRSFEKRDRLRIH
ILHVHEKHRPHKCSTCGKCFSQSSSLNKHMRVHSGDRPYQCVYCTKRFTASSILRTHI
RQHSGEKPFKCKYCGKSFASHAAHDSHVRRSHKEDDGCSCSICGKIFSDQETFYSHMK
FHEDY"
BASE COUNT 503 a 601 c 573 g 457 t
ORIGIN
1 ccgagcccga gtggcctacc gagcccgagt ggccccgcag cgtccaggag gcgcccgctc
61 cgcggtggcg ctcttggagg tggtgtcgga gagccgccga gcgtgcggtc ccgggatggc
121 tctaccccgg ccaagtgagg ccgtgcctca ggacaaggtg tgctacccgc cggagagcag
181 cccgcagaac ctggccgcgt actacacgcc tttcccgtcc tatggacact acagaaacag
241 cctggccacc gtggaggaag acttccaacc tttccggcag ctggaggccg cagcgtctgc
301 tgcccccgcc atgcccccct tccccttccg gatggcgcct cccttgctga gcccgggtct
361 gggcctacag agggagcctc tctacgatct gccctggtac agcaagctgc caccgtggta
421 cccaattccc cacgtcccca gggaagtgcc gcccttcctg agcagcagcc acgagtacgc
481 gggtgccagc agtgaagatc tgggccacca aatcattggt ggcgacaacg agagtggccc
541 gtgttgtgga cctgacactt taattccacc gccccctgcg gatgcttctc tgttacctga
601 ggggctgagg acctcccagt tattaccttg ctcacccagc aagcagtcag aggatggtcc
661 caaaccctcc aaccaagaag ggaagtcccc tgctcggttc cagttcacgg aggaggacct
721 gcacttcgtt ctgtacgggg tcactcccag cctggagcac ccagccagcc tgcaccatgc
781 gatttcaggc ctcctggtcc ccccagacag ctctggatct gattctcttc ctcaaactct
841 ggatgaagac tcccttcaac ttccagaagg tctatgcctc atgcagacgg tgtttggtga
901 agtcccacat tttggtgtgt tctgcagtag ttttatcgcc aaaggagtca ggtttgggcc
961 ctttcaaggt aaagtggtca atgccagtga agtgaagacc tacggagaca attctgtgat
1021 gtgggagatc tttgaagatg gtcatttgag ccactttata gatggaaaag gaggtacggg
1081 gaactggatg tcctatgtca actgtgcccg cttccccaag gagcagaacc tagttgctgt
1141 gcagtgtcaa gggcatatat tttatgagag ctgcaaagag attcatcaga accaagagct
1201 ccttgtgtgg tatggagact gctatgagaa atttctggat attcctgtga gccttcaggt
1261 cacagagccg gggaagcagc catctgggcc ctctgaagag tctgcagaag gctacagatg
1321 tgaaagatgt gggaaggtat ttacctacaa atattacaga gataagcacc tcaagtacac
1381 cccctgtgtg gacaagggcg ataggaaatt tccctgttct ctctgcaaac gatcctttga
1441 gaagcgggac cggcttcgga tccacattct tcatgttcat gagaagcacc ggcctcacaa
1501 gtgttctaca tgtgggaaat gtttctctca gtcttccagc ctaaacaaac acatgcgagt
1561 ccactctgga gacagaccat accagtgtgt gtattgtact aagaggttca cagcctccag
1621 catactccgc acacacatca ggcagcactc cggggagaag cccttcaaat gcaagtactg
1681 tggtaaatct tttgcatccc atgctgccca tgacagccat gtccggcgtt cacacaagga
1741 ggacgatggc tgctcatgca gcatctgtgg gaaaatcttc tcagatcaag aaacattcta
1801 ctcccacatg aagtttcatg aagactacta gccctgccag gcacaatgac tcacgcctgt
1861 aatcccagca ctttgggagg cagaggtggg tggatcactc aagtccagga gttcgagacc
1921 agcctgggca acatggtgaa atcctgtctc taccaaaaaa atacaaaaat cagctggggg
1981 tggtggcaca tgcctgtggt tccagccact caggaggtcg aggtggcagg atggtttgag
2041 cacaggagac ggaggttgct gtgagctgag atcgccccac tgcttttcaa cctgggtgac
2101 agaaccagac cctgtctcaa aaaaaaaaaa aaaa
//