LOCUS BC051291 1917 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens retinol dehydrogenase 11 (all-trans/9-cis/11-cis), mRNA (cDNA clone MGC:59671 IMAGE:3533223), complete cds. ACCESSION BC051291 VERSION BC051291.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1917) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1917) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: a Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20070271. FEATURES Location/Qualifiers source 1..1917 /db_xref="H-InvDB:HIT000053607" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59671 IMAGE:3533223" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1917 /gene="RDH11" /gene_synonym="ARSDR1" /gene_synonym="CGI-82" /gene_synonym="FLJ32633" /gene_synonym="HCBP12" /gene_synonym="MDT1" /gene_synonym="PSDR1" /gene_synonym="RALR1" /gene_synonym="SCALD" /db_xref="GeneID:51109" /db_xref="HGNC:HGNC:17964" /db_xref="MIM:607849" CDS 40..957 /gene="RDH11" /gene_synonym="ARSDR1" /gene_synonym="CGI-82" /gene_synonym="FLJ32633" /gene_synonym="HCBP12" /gene_synonym="MDT1" /gene_synonym="PSDR1" /gene_synonym="RALR1" /gene_synonym="SCALD" /codon_start=1 /product="RDH11 protein" /protein_id="AAH51291.1" /db_xref="GeneID:51109" /db_xref="HGNC:HGNC:17964" /db_xref="MIM:607849" /translation="MVELMFPLLLLLLPFLLYMAAPQIRKMLSSGVCTSTVQLPGKVV VVTGANTGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFL AEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIV NVFSLAHHLGRIHFHNLQGEKFYNAGLAYCHSKLANILFTQELARRLKGSGVTTYSVH PGTVQSELVRHSSFMRWMWWLFSFFIKTPQQGAQTSLHCALTEGLEILSGNHFSDCHV AWVSAQARNETIARRLWDVSCDLLGLPID" BASE COUNT 566 a 438 c 446 g 467 t ORIGIN 1 ctggagcatc ccgctctggt gccgctgcag ccggcagaga tggttgagct catgttcccg 61 ctgttgctcc tccttctgcc cttccttctg tatatggctg cgccccaaat caggaaaatg 121 ctgtccagtg gggtgtgtac atcaactgtt cagcttcctg ggaaagtagt tgtggtcaca 181 ggagctaata caggagctcg agtatattta gcttgccggg atgtggaaaa gggggaattg 241 gtggccaaag agatccagac cacgacaggg aaccagcagg tgttggtgcg gaaactggac 301 ctgtctgata ctaagtctat tcgagctttt gctaagggct tcttagctga ggaaaagcac 361 ctccacgttt tgatcaacaa tgcaggagtg atgatgtgtc cgtactcgaa gacagcagat 421 ggctttgaga tgcacatagg agtcaaccac ttgggtcact tcctcctaac ccatctgctg 481 ctagagaaac taaaggaatc agccccatca aggatagtaa atgtgttttc cctcgcacat 541 cacctgggaa ggatccactt ccataacctg cagggcgaga aattctacaa tgcaggcctg 601 gcctactgtc acagcaagct agccaacatc ctcttcaccc aggaactggc ccggagacta 661 aaaggctctg gcgttacgac gtattctgta caccctggca cagtccaatc tgaactggtt 721 cggcactcat ctttcatgag atggatgtgg tggcttttct cctttttcat caagactcct 781 cagcagggag cccagaccag cctgcactgt gccttaacag aaggtcttga gattctaagt 841 gggaatcatt tcagtgactg tcatgtggca tgggtctctg cccaagctcg taatgagact 901 atagcaaggc ggctgtggga cgtcagttgt gacctgctgg gcctcccaat agactaacag 961 gcagtgccag ttggacccaa gagaagactg cagcagacta cacagtactt cttgtcaaaa 1021 tgattctcct tcaaggtttt caaaaccttt agcacaaaga gagcaaaacc ttccagcctt 1081 gcctgcttgg tgtccagtta aaactcagtg tactgccaga ttcgtctaaa tgtctgtcat 1141 gtccagattt actttgcttc tgttactgcc agagttacta gagatatcat aataggataa 1201 gaagaccctc atatgacctg cacagctcat tttccttctg aaagaaacta ctacctagga 1261 gaatctaagc tatagcaggg atgatttatg caaatttgaa ctagcttctt tgttcacaat 1321 tcagttcctc ccaaccaacc agtcttcact tcaagagggc cacactgcaa cctcagctta 1381 acatgaataa caaagactgg ctcaggagca gggcttgccc aggcatggtg gatcaccgga 1441 ggtcagtagt tcaagaccag cctggccaac atggtgaaac cccacctcta ctaaaaattg 1501 tgtatatctt tgtgtgtctt cctgtttatg tgtgccaagg gagtattttc acaaagttca 1561 aaacagccac aataatcaga gatggagcaa accagtgcca tccagtcttt atgcaaatga 1621 aatgctgcaa agggaagcag attctgtata tgttggtaac tacccaccaa gagcacatgg 1681 gtagcaggga agaagtaaaa aaagagaagg agaatactgg aagataatgc acaaaatgaa 1741 gggactagtt aaggattaac tagcccttta aggattaact agttaaggat taatagcaaa 1801 agatattaaa tatgctaaca tagctatgga ggaattgagg gcaagcaccc aggactgatg 1861 aggtcttaac aaaaaccagt gtggcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa //