LOCUS BC050683 2332 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens zinc finger protein 410, mRNA (cDNA clone MGC:60250
IMAGE:5752452), complete cds.
ACCESSION BC050683
VERSION BC050683.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2332)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2332)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: g Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10863994.
FEATURES Location/Qualifiers
source 1..2332
/db_xref="H-InvDB:HIT000053553"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60250 IMAGE:5752452"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2332
/gene="ZNF410"
/gene_synonym="APA-1"
/gene_synonym="APA1"
/db_xref="GeneID:57862"
CDS 261..1556
/gene="ZNF410"
/gene_synonym="APA-1"
/gene_synonym="APA1"
/codon_start=1
/product="ZNF410 protein"
/protein_id="AAH50683.1"
/db_xref="GeneID:57862"
/translation="MLSDELESKPELLVQFVQNTSIPLGQGLVESEAKDITCLSLLPV
TEASECSRLMLPDDTTNHSNSSKEVPSSAVLRSLRVNVGPDGEETRAQTVQKSPEFLS
TSESSSLLQDLQPSDSTSFILLNLTRAGLGSSAEHLVFVQDEAEDSGNDFLSSESTDS
SIPWFLRVQELAHDSLIAATRAQLAKNAKTSSNGENVHLGSGDGQSKDSGPLPQVEKK
LKCTVEGCDRTFVWPAHFKYHLKTHRNDRSFICPAEGCGKSFYVLQRLKVHMRTHNGE
KPFMCHESGCGKQFTTAGNLKNHRRIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVVHS
GEKPHQCQVCGKTFSQSGSRNVHMRKHHLQLGAAGSQEQEQTEVLAEGSPRSLSSVPD
VTHHLVTMQSGRQSYEVSVLTAVNPQELLNQGDLTERRT"
BASE COUNT 658 a 514 c 549 g 611 t
ORIGIN
1 gccaaacttc ctgtcccgcg ctcgagctgc ttccggcggg agccggaaga cgctgtgtgt
61 ggacggaatt cgggaccgac tgacggccgg ccggcttccc ggaactggaa ggttacattg
121 attacccacc tagtacaaca tcttacggga agagcatagt atttcctaga ggaatatgaa
181 cataacagga aggtatcatt ggctctgaat taaatttgaa cttgtcccct gaatagctac
241 aggttttgga agctgaatca atgttatcag atgagttaga atccaaacca gagctcctgg
301 tacagtttgt tcagaatacg tccatcccat tgggacaggg gcttgtagaa tcagaagcta
361 aagatattac ttgcttgtcc ctccttcccg tgactgaagc ctcagaatgc agtcggctaa
421 tgttaccaga tgatactaca aatcattcta actcctccaa ggaggtccct tcctcagctg
481 ttttgagaag ccttcgggtg aatgtgggtc cagacggaga ggagacgaga gctcagactg
541 tacagaaatc cccggagttt ttgtccactt cagagtcttc tagcttgttg caagatctac
601 agccaagtga tagcacttct tttattcttc ttaacctaac aagagcaggt ctgggctctt
661 cagctgagca cttagtgttt gtacaggatg aggcagaaga ttcagggaat gatttcctct
721 ccagtgagag cacagacagt agcattccat ggttcctccg ggttcaggag ttggcccatg
781 acagtttgat tgctgctact cgtgcacaac tggcaaagaa tgcaaaaacc agcagcaatg
841 gagaaaatgt ccaccttggt tctggtgatg ggcagtcaaa agattctggg ccccttcctc
901 aagtggaaaa gaagctcaag tgtacagttg aaggttgtga ccggacattt gtatggccag
961 ctcactttaa ataccacctc aagactcatc gaaatgaccg ctccttcatc tgtcctgcag
1021 aaggttgtgg gaaaagcttc tatgtgctgc agaggctgaa ggtgcacatg aggacccaca
1081 atggagagaa gccctttatg tgccatgagt ctggctgtgg taagcagttt actacagctg
1141 gaaacctgaa gaaccaccgg cgcatccaca caggagagaa acctttcctt tgtgaagccc
1201 aaggatgtgg ccgttccttt gctgagtatt ctagcctccg aaaacatctg gtggttcact
1261 caggagagaa gcctcatcag tgccaagtct gtgggaagac cttctctcag agtggaagca
1321 ggaatgtgca tatgagaaag catcacctgc agctgggagc agctgggagt caagagcagg
1381 agcaaactga ggtgcttgct gaaggatccc cacgttccct gtcttcagtg cctgatgtga
1441 cacatcacct ggtgaccatg cagtcaggga ggcaatcata tgaagtttct gtcttaactg
1501 cagtaaatcc acaagagtta ctaaaccaag gagatttaac tgaaagacgg acatgagcgt
1561 gggtgctgac tcctggaaga gcaactctat ctgatctcaa aatgcgtata ctgggaacag
1621 gatgccttag cccacaacag aaccagaatg aatctttgaa ggcacaagac tctgcttttg
1681 ccactcttcc tctttcctgg tatagaagat ggatgtagga gagcttcttt tctaactacc
1741 atctgatcag acaaggaatg aagcaatgac tgtgggctgg gaaactgtac ctacctctct
1801 tcccactgca aatttctggg atagaccaaa agtgaatttg attatgtgtt ggctgaagtt
1861 cttcattctg actgttgagg ggaggttttc ctttgaagag ttttcatccc agactcagct
1921 gtcttttcac atggatgaaa taattcctgc taccaacaac agagcttcac caggaagttg
1981 agttttcaag atgccttgtt gctttgaaga agggagtgat gtcaattctc ttgttacatt
2041 ctccctttag caacctgagt aagagactct ctgccactgg gctgcaaaaa aataaattac
2101 ttgaatctcc ccttggccca ggctgaggta ctatcttgtc ctatacactt ctacttggtc
2161 actttgcttt cttcgttaat ggaacataca gtagcatgtt aagagggatt tcatgttttt
2221 gtttttttaa agttaaaaat tacatgatgc agagattcag gttttccttt aaataaacaa
2281 aacagcccag tcataaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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