LOCUS BC050609 1570 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, CCHC domain containing 17, mRNA (cDNA
clone MGC:60064 IMAGE:6527025), complete cds.
ACCESSION BC050609
VERSION BC050609.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1570)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1570)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: p Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361575.
FEATURES Location/Qualifiers
source 1..1570
/db_xref="H-InvDB:HIT000053515"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60064 IMAGE:6527025"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1570
/gene="ZCCHC17"
/gene_synonym="HSPC251"
/gene_synonym="pNO40"
/gene_synonym="PS1D"
/gene_synonym="RP11-266K22.1"
/db_xref="GeneID:51538"
/db_xref="HGNC:HGNC:30246"
CDS 90..815
/gene="ZCCHC17"
/gene_synonym="HSPC251"
/gene_synonym="pNO40"
/gene_synonym="PS1D"
/gene_synonym="RP11-266K22.1"
/codon_start=1
/product="zinc finger, CCHC domain containing 17"
/protein_id="AAH50609.1"
/db_xref="GeneID:51538"
/db_xref="HGNC:HGNC:30246"
/translation="MNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGLV
HRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNN
VIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPD
EEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSESDTGKRARH
TSKDSKAAKKKKKKKKHKKKHKE"
BASE COUNT 478 a 323 c 408 g 361 t
ORIGIN
1 gcgcagcgac tcggggacct ggagctgacg cctagacact tgtattagct ttaatagaag
61 agaaatggag gagccataga atattaagga tgaattcagg aaggcctgag accatggaaa
121 acttgcctgc tctctacact attttccaag gagaggttgc tatggtgaca gactatgggg
181 cctttatcaa aatcccaggc tgtcggaagc aaggtctggt ccatcgaact catatgtcat
241 cctgtcgggt ggataagccc tctgagatag tagatgttgg agataaagtg tgggtgaagc
301 ttattggccg agagatgaaa aatgatagaa taaaagtatc cctctccatg aaggttgtca
361 atcaagggac tgggaaagac cttgatccca acaatgttat cattgagcaa gaagagaggc
421 ggaggcgatc cttccaggat tacactgggc agaagatcac ccttgaggct gtcttgaaca
481 ctacctgcaa gaagtgtggc tgtaaaggcc actttgcaaa agattgtttc atgcaaccag
541 gtgggactaa atactctctg atacctgatg aggaagagga aaaggaagag gcaaagtcag
601 cagagtttga gaagcctgac cctacaagga atccttctag aaaaagaaag aaggagaaga
661 agaaaaagaa acatagagat aggaagtcat ctgactctga cagctcagac tctgagagtg
721 atacaggcaa gagggcaagg cacacatcaa aagacagcaa ggcagcaaag aagaagaaaa
781 agaagaagaa gcacaagaag aagcacaagg agtgagagta taaagagtgt agggggtggt
841 tgagagtaag aaaccaggag cctcgtgcct tgagactcct ggaaagactc aatagtgaga
901 atatagcctc ccaccccatt aacttcgctc ccatgggaga tggcttcccc tcatgcaaca
961 ggcaggtttg ggagttagag gtcaaaagca gctgcctgaa tgagttgttg tttccttatc
1021 actcctggtc cctttgcaag tgaaccctgc agctcaccca ttcattcacc caacttcctt
1081 cattcagcag gaggtcctat taccctctcc agctgccact gccagagctg gattcctgta
1141 aaggagtcca ggctagagcc acagagactg ttgtggaggt gagttcggct gtagttagag
1201 tgattggacc cttcctattg gtctgtcctg ggccaactgg tgggtgatct ctgctgcatc
1261 caacatggga gcagagactg gcagcaggag gggggaacat ggtgagaagt ggtgctcact
1321 tttcccattc ctcctaacat agttctacta tgctagaagt ggcatccagc ggccacagct
1381 agaaaacagt ctgcagtgtg acttaatttg tgtattgcat tccagcagac cactgaacca
1441 gacagcgaag ccaagataat tgttctactt tgtatttact actgtgtgaa tcagttgatt
1501 ctacttcagg tccttgctta aattcctgtc actaaatgga aatgtgtttg gttttaaaaa
1561 aaaaaaaaaa
//