LOCUS BC050527 3654 bp mRNA linear HUM 16-DEC-2006 DEFINITION Homo sapiens NLR family, CARD domain containing 5, mRNA (cDNA clone IMAGE:5589287), partial cds. ACCESSION BC050527 VERSION BC050527.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3654) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3654) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Invitrogen cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: g Column: 24. FEATURES Location/Qualifiers source 1..3654 /db_xref="H-InvDB:HIT000259136" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5589287" /tissue_type="Ovary, pooled from 3 adults" /clone_lib="NIH_MGC_125" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..3654 /gene="NLRC5" /gene_synonym="CLR16.1" /gene_synonym="FLJ21709" /gene_synonym="NOD27" /db_xref="GeneID:84166" /db_xref="HGNC:HGNC:29933" CDS <1..1163 /gene="NLRC5" /gene_synonym="CLR16.1" /gene_synonym="FLJ21709" /gene_synonym="NOD27" /codon_start=3 /product="NLRC5 protein" /protein_id="AAH50527.1" /db_xref="GeneID:84166" /db_xref="HGNC:HGNC:29933" /translation="ELPLSSRRMRLTHCGLQEKHLEQLCKALGGSCHLGHLHLDFSGN ALGDEGAARLAQLLPGLGALQSLNLSENGLSLDAVLGLVRCFSTLQWLFRLDISFESQ HILLRGDKTSRDMWATGSLPDFPAAAKFLGFRQRCIPRSLCLSECPLEPPSLTRLCAT LKDCPGPLELQLSCEFLSDQSLETLLDCLPQLPQLSLLQLSQTGLSPKSPFLLANTLS LCPRVKKVDLRSLHHATLHFRSNEEEEGVCCGLSANLLGDSGLRCLLECLPQVPISGL LDLSHNSISQESALYLLETLPSCPRVREASVNLGSEQSFRIHFSREDQAGKTLRLSEC SFRPEHVSRLATGLSKSLQLTELTLTQCCLGQKQLAILLSLVGRPAGLFSLS" BASE COUNT 811 a 1032 c 1031 g 780 t ORIGIN 1 ctgagctgcc tctgagctcc cgaaggatga ggctgacaca ttgtggcctc caagaaaagc 61 acctagagca gctctgcaag gctctgggag gaagctgcca cctcggtcac ctccacctcg 121 acttctcagg caatgctctg ggggatgaag gtgcagcccg gctggctcag ctgctcccag 181 ggctgggagc tctgcagtcc ttgaacctca gtgagaacgg tttgtccctg gatgccgtgt 241 tgggtttggt tcggtgcttc tccactctgc agtggctctt ccgcttggac atcagctttg 301 aaagccaaca catcctcctg agaggggaca agacaagcag ggatatgtgg gccactggat 361 ctttgccaga cttcccagct gcagccaagt tcttagggtt ccgtcagcgc tgcatcccca 421 ggagcctctg cctcagtgag tgtcctctgg agcccccaag cctcacccgc ctctgtgcca 481 ctctgaagga ctgcccggga cccctggaac tgcaattgtc ctgtgagttt ctgagtgacc 541 agagcctgga gactctactg gactgcttac ctcaactccc tcagctgagc ctgctgcagc 601 tgagccagac gggactgtcc ccgaaaagcc ccttcctgct ggccaacacc ttaagcctgt 661 gtccacgggt taaaaaggtg gatctcaggt ccctgcacca tgcaactttg cacttcagat 721 ccaacgagga ggaggaaggc gtgtgctgtg gtctctcagc aaacctgctg ggcgacagcg 781 gactcagatg ccttctggaa tgtctgccgc aggtgcccat ctccggtttg cttgatctga 841 gtcacaacag catttctcag gaaagtgccc tgtacctgct ggagacactg ccctcctgcc 901 cacgtgtccg ggaggcctca gtgaacctgg gctctgagca gagcttccgg attcacttct 961 ccagagagga ccaggctggg aagacactca ggctaagtga gtgcagcttc cggccagagc 1021 acgtgtccag gctggccacc ggcttgagca agtccctgca gctgacggag ctcacgctga 1081 cccagtgctg cctgggccag aagcagctgg ccatcctcct gagcttggtg gggcgacccg 1141 cagggctgtt cagcctcagc tgaagcggtt tcaaggtgca ggagccgtgg gcggacagag 1201 ccagggttct ctccctgtta gaagtctgcg cccaggcctc aggcagtgtc actgaaatca 1261 gcatctccga gacccagcag cagctctgtg tccagctgga atttcctcgc caggaagaga 1321 atccagaagc tgtggcactc aggttggctc actgtgacct tggagcccac cacagccttc 1381 ttgtcgggca gctgatggag acatgtgcca ggctgcagca gctcagcttg tctcaggtta 1441 acctctgtga ggacgatgat gccagttccc tgctgctgca gagcctcctg ctgtccctct 1501 ctgagctgaa gacatttcgg ctgacctcca gctgtgtgag caccgagggc ctcgcccacc 1561 tggcatctgg tctgggccac tgccaccact tggaggagct ggacttgtct aacaatcaat 1621 ttgatgagga gggcaccaag gcgctgatga gggcccttga ggggaaatgg atgctaaaga 1681 ggctggacct cagtcacctt ctgctgaaca gctccacctt ggccttgctt actcacagac 1741 taagccagat gacctgcctg cagagcctca gactgaacag gaacagtatc ggtgatgtcg 1801 gttgctgcca cctttctgag gctctcaggg ctgccaccag cctagaggag ctggacttga 1861 gccacaacca gattggagac gctggtgtcc agcacttagc taccatcctg cctgggctgc 1921 cagagctcag gaagatagac ctctcaggga atagcatcag ctcagccggg ggagtgcagt 1981 tggcagagtc tctcgttctt tgcaggcgcc tggaggagtt gatgcttggc tgcaatgccc 2041 tgggggatcc cacagccctg gggctggctc aggagctgcc ccagcacctg agggtcctac 2101 acctaccatt cagccatctg ggcccaggtg gggccctgag cctggcccag gccctggatg 2161 gatcccccca tttggaagag atcagcttgg cggaaaacaa cctggctgga ggggtcctgc 2221 gtttctgtat ggagctcccg ctgctcagac agatagacct ggtttcctgt aagattgaca 2281 accagactgc caagctcctc acctccagct tcacgagctg ccctgccctg gaagtaatct 2341 tgctgtcctg gaatctcctc ggggatgagg cagctgccga gctggcccag gtgctgccgc 2401 agatgggccg gctgaagaga gtggacctgg agaagaatca gatcacagct ttgggggcct 2461 ggctcctggc tgaaggactg gcccaggggt ctagcatcca agtcatccgc ctctggaata 2521 accccattcc ctgcgacatg gcccagcacc tgaagagcca ggagcccagg ctggactttg 2581 ccttctttga caaccagccc caggcccctt ggggtacttg atggccccct caagacctct 2641 ggaatccagc caagtgatgc acccaaatga tccacctttc gcccactggg ataaatgact 2701 caggaaagaa gagcctcggc agggcgctct gcactccacc caggaggaag gatacgtgtg 2761 tcctgctgca gtcctcaggg agaacttttt tgggaaccag gagctgggtc tggacaaagg 2821 agtaccctgc attacgtggg atatgtgtga tcaattgggg acatgcgaca cacaatgagg 2881 gtgtcatgac aatgcatgac acgtacggtt atatgtggca gtgtgacccc ttgacatgtg 2941 gcgttacatg aaagtcagtg tggcacgtgt tctgtggcat gggtgctggc atcccaagtg 3001 gcaggataca tgattgttgg tctatatatg acacatgaca aatgtccatg tcacaggact 3061 catggctggc cagatgacct caggctggcc caagatctaa tttattaatt tttaaagcaa 3121 atacatattt atagattgtg tgtatggagc agctaagtca ggaaaagtct tccgcccgag 3181 ctgggagggg agagtgtcca tgcactgacc agtccagggg ctcaagggcc agggctctgg 3241 aacaagccag ggactcagcc attaagtccc ctcctgcctc aatcctcagc ctacccatct 3301 ataaacttga tgactcctcc cttacttaca tactagcttc caaggacagg tggaggtagg 3361 gccagcctgg cgggagtgga gaagcccagt ctgtcctatg taagggacaa agccaggtct 3421 aatggtactg ggtagggggc actgccaaga caataagcta ggctactggg tccagctact 3481 actttggtgg gattcaggtg agtctccatg cacttcacat gttacccagt gttcttgtta 3541 cttccaagga gaaccaagaa tggctctgtc acactcgaag ccaggtttga tcaataaaca 3601 caatggtatt ccacgtcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //