LOCUS BC050286 4267 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens zinc finger protein 789, mRNA (cDNA clone
IMAGE:5268572), with apparent retained intron.
ACCESSION BC050286
VERSION BC050286.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4267)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4267)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 74 Row: f Column: 13
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4267
/db_xref="H-InvDB:HIT000099131"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5268572"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1051 a 981 c 1008 g 1227 t
ORIGIN
1 ggtaaggggt gattcgccga ggggcgcgga ccagacagac ctcgggtcag gcccgggaac
61 cccgagagga gagcccagcc cctggtggag gcggcttggc ggagattcgg agccgtcagc
121 agctcagcca gacgtccagg atcccacccc ttgcaaaaga ccaggccgtg gaagccatgt
181 tcccaccagc cagggggaag gtgcgggaat gcagatggct gagtaggtca gattgaggac
241 atggcagcgc agctctggta aaagagtgac actctggata atggtgagaa agggcctgca
301 accgtagcag tggaactcag gtttgatagg caggaaagaa agtccgtata atttgggagg
361 ttctggtgcc tgcctgcaga ggggagctac gtgaagcttc tcaggatggt ctcaggatgg
421 gggtgggcat ttcctgttac tgaccactta taggacagcg aacgtttgcc ctttccctgc
481 acacatcccc tctgaaccca tgcagtgtct tgtgagagca aggagtgtgt agacagccgc
541 tgggcccctt tgcccagagg gctgcagtgg tgtgggaggg agagtgtggc agcttcagtg
601 ctcagcccac tggagggggc agtcacttgc agatgtaatg tcccctgtgc tcactgtgct
661 gtgtccactg ttgcccactc tggatatgct ccccaggcgt ctgcgccttg gtctgtacct
721 tttatattct ccagcaacgg gctcccctgg tctctggcat ctgcttggct tgtggcaatg
781 ggatgaagag ggttggagga caggggacag ggcgccggag gcctggggaa aactgaggtt
841 gggtttctct tcccacggct ccctccccac tgggctgtgg gatgggtgtg gctgcatcct
901 gttcagccgc agctggtctt gctccccttc cagcagcctt ctgggctcca gcagccctcc
961 ccaccttacc ccttcagacc tagcaggccc tggttcccca gggtggccag gacctgcgag
1021 cttccacatt tcttgttcat gttcattgag actattcatc cctttgtaaa tagtctgcac
1081 attaaccaac cccccagtga cctcatctct ttcctaagga acctggggca gaagcaatag
1141 gttattttta tagagcagcg gtcagcaaac tgccctggac cgcttggtaa agtttccctg
1201 aaacacagct gtgcccattc gcttacttgt ccacggctgc ttttgtgctc caacacaaag
1261 gctgttcctc agattgttga tttgctgttc ctctaatcaa cagcagattt gaggaactgg
1321 aacagagacc agagggcctg aaaagcctaa aatatttacc atctggccct ttagagatta
1381 attgtgtcga ccccgtggta tggaagccag cacatgtctg gcctgagggc catcaggcct
1441 gaaaggagcc ctgaatatat tccttatgaa ttgggtgccc ttggcccaca ctctacctcc
1501 caaaccttgg tttcctcagc tgtggaataa tcattgagcg taagttattt taagaattgc
1561 agttaccttt atcagctact tttccaggag ctgctctcgt ttgaggatgt ggcgatgtac
1621 ttcaccagag aggagtgggg ccacctcaac tggggtcaga aggacctcta ccgagatgtg
1681 atgttggaga actacaggaa catggtcttg ctgggtagga cacggcttga agattgggct
1741 ttgtctgtgt tctgagtgtc tgtgcaagcc cttagtccct tatctgcaat tccagaatca
1801 gaaaaagcgg tgaaaaccga aaggtttttt tataactcgt gtggctacaa gccctgacca
1861 gacatcacca cagtgaaacc tgacttcatc ctataggaaa ccatttattg tctttatttt
1921 tccaacttgg tgtgcatatc tgtataccca acttcagaaa taacagtgta ggccaggtgc
1981 ggtggctcac acctgtaatc ccagcacttt gggattccga ggcgggtgga tcacatgagg
2041 tcagtagttt gagaccagcc tggccaatat ggtgaaaccc agctctactt aagatgcgaa
2101 aattagcctg gtgtggtggt gcacgcttgt agtcccagtt acttgggagg ctgaggcagg
2161 agaatcgctt gaacccggga ggcagaggtt gcattgagcc gagatcatgc cgctgcattc
2221 cagcctgggt gacagagcga gactccgtct caaaacaaaa caaaacaaca acaaaaataa
2281 cagtgtattt gagggcacca ctccaaaccc tactggggat gatacgttat gtaaaatatt
2341 tacaccaggt cacctttctg aaatgggaaa aattctgact cctgaaacac atctggtcct
2401 aagggtttca cataagggac tggggacagt gaatagtcgt gttgtgttag ggctcagacc
2461 gagacacttc atgcattctt cactctcacc tcgtgttcct catctgtaag acctccagga
2521 gttgagaatt atggtagatt tacattccaa aggctcactt cttatgctct tgaaagtctt
2581 tttctttctt ttctctggaa atgggtaact tcttggtgtg taacattagt gggtgctcag
2641 gaaatgattt tcaaccaact tcatttctga accttcactg cttccattct tttcaggagc
2701 ctaccctgtc ctagtccact gtagtctccc actgtgggag ttgccttgct aaatagtttt
2761 ctttccgggg tcacatgttt aacccttgca ctgacactct tagcacagag tcttgaccac
2821 ctctgtggga ctgtccaccc acctctggat ttttataatt ttaattttcc ctttaaaagc
2881 attacaggag catacataag tacatggaag gcatagaaaa ggaggagaag aggaaagtgt
2941 tcatgggtaa cactgttaat attttggaag gtttcctgcc agtctttttt tcctatgcct
3001 ttacaaaagt agctgagcat attctatgtg caatcctgta atctgtttta aatgtaacat
3061 tattgtatca gcatttcccc acataatcag taaacgagca taatataatt ccattgtgtg
3121 gtccataaaa atatttcatt gttttcccat gtggggacat tgagcttgcc tttgtttgtt
3181 cgttggtttg cttgtgtatt tataatgttt gaatagatgt ttgagtataa atctttgcat
3241 gaatttttga tcatttccca agatactttc ccaaaatcag aattttgaag ttaaatgaga
3301 tggcacttta atctttattg attactgaat gattcttcaa caaactttgt actgttttgc
3361 atatccaata gtaacatttt agagtgcttc tttttttttt ttgagacaga gtttcgctct
3421 tgttgcccag gcaggagtac aatggcagga tctcagctca ccacaacctc tgcctccccg
3481 gttcaagtga ttctcctgcc tcagactcct gagtagctgg gattacaggc atgtgccacc
3541 acacctagct aattttgtat ttttagtaga gacggggttt cgccatgttg gtcaggctgg
3601 tctcaaactc ccgatctcgg gtgacccgcc cacctcagcc tcccaaagtg ctgggattac
3661 aggtgtgagc cactgcaccc agctgagagt gcttctttac tatatcactg ccttctttta
3721 tggattttac tagttctaaa aataattttc attacagaaa ttttggaaaa tacatcagta
3781 aatagagtag ataataaaaa tcacctgcag gcctactttc cagaagtaac tcttgttatt
3841 aacattttgg tttacttttt cccagtccgt ctatgtgtct attacaggga aagaatccct
3901 tatccaaaat gctggggacc aaaagtgttt tggatttcgg atttttcttt tttggatttt
3961 ggaatactca taaatatata ataagataat ttgaggatct gacaagaaat tcacttatgt
4021 ttcatataca ccttagacat gtagcttctt caagctacgc ttgatttaat tgttcccttt
4081 tgatattcag tttatttcca gtttgatgct gcaataccac tgtgctgaac gtctctggca
4141 cattcatctt ggttgcaatt gtactttagg ctatatttct aagagcgaaa tgaccacagc
4201 caaaggtatg aacattgttc aggctttcaa taaagactgc cagatattta caaaaaaaaa
4261 aaaaaaa
//