LOCUS BC042362 1180 bp mRNA linear HUM 20-OCT-2005 DEFINITION Homo sapiens ribosomal protein S27a, mRNA (cDNA clone MGC:57125 IMAGE:4831143), complete cds. ACCESSION BC042362 VERSION BC042362.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1180) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1180) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 106 Row: f Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27436941. FEATURES Location/Qualifiers source 1..1180 /db_xref="H-InvDB:HIT000334007" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57125 IMAGE:4831143" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1180 /gene="RPS27A" /gene_synonym="CEP80" /gene_synonym="HUBCEP80" /gene_synonym="UBA80" /gene_synonym="UBCEP1" /db_xref="GeneID:6233" /db_xref="HGNC:HGNC:10417" /db_xref="IMGT/GENE-DB:10417" /db_xref="MIM:191343" CDS 39..326 /gene="RPS27A" /gene_synonym="CEP80" /gene_synonym="HUBCEP80" /gene_synonym="UBA80" /gene_synonym="UBCEP1" /codon_start=1 /product="RPS27A protein" /protein_id="AAH42362.1" /db_xref="GeneID:6233" /db_xref="HGNC:HGNC:10417" /db_xref="IMGT/GENE-DB:10417" /db_xref="MIM:191343" /translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI FAGKQLEDGRTLSDYNIQKVCLGEEQPLLKKNVILEIFYFTFFETGSDSVT" BASE COUNT 340 a 243 c 267 g 330 t ORIGIN 1 cttttcgatc cgccatctgc ggtggagccg ccaccaaaat gcagattttc gtgaaaaccc 61 ttacggggaa gaccatcacc ctcgaggttg aaccctcgga tacgatagaa aatgtaaagg 121 ccaagatcca ggataaggaa ggaattcctc ctgatcagca gagactgatc tttgctggca 181 agcagctgga agatggacgt actttgtctg actacaatat ccaaaaggtc tgtctagggg 241 aagagcagcc tcttttaaaa aaaaatgtta ttttggaaat tttttatttt actttttttg 301 agacaggctc tgactctgtc acctagggtg gagtgagtgg cgcagtcact gcaacctcca 361 cctctcagac tcaggtggtc ctcccacctc agcctcctgt agttggaact ataggcaccc 421 gccaccatgc ccaggctggt ctcaaactcc tgggcttaag tgatcttccc accgtggcct 481 cccagcgctg ggattacaga cgtgagccac tccatgtggt gtattctgga cattttgaca 541 cacaaaaagg gaaaatggca ttcgaatagc agtagatttt taggtaactc ctatactgat 601 acttgagaag cactgctata gttctcccat tatgaatttt gcaagttgta tcccatggtg 661 taatgtaatg cattctttaa tgtccctata aactgtcagt taagaatcag atactttatt 721 gggtttgggg gctgcaagat tccctcaaat gttattgtgt gctgctactg cttttaatta 781 gaaaatgcat aatgttgggt gtgcccattc ttagtggaat catgaaagct tgcttcattc 841 ttccattaac aggagtctac tcttcatctt gtgttgagac ttcgtggtgg tgctaagaaa 901 aggaagaaga agtcttacac cactcccaag aagaataagc acaagagaaa gaaggttaag 961 ctggctgtcc tgaaatatta taaggtggat gagaatggca aaattagtcg ccttcgtcga 1021 gagtgccctt ctgatgaatg tggtgctggg gtgtttatgg caagtcactt tgacagacat 1081 tattgtggca aatgttgtct gacttactgt ttcaacaaac cagaagacaa gtaactgtat 1141 gagttaataa aagacatgaa ctaacaaaaa aaaaaaaaaa //