LOCUS BC041661 3931 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens zinc finger and SCAN domain containing 12, mRNA (cDNA
clone MGC:47655 IMAGE:6063526), complete cds.
ACCESSION BC041661
VERSION BC041661.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3931)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3931)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 44917602.
FEATURES Location/Qualifiers
source 1..3931
/db_xref="H-InvDB:HIT000052585"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47655 IMAGE:6063526"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3931
/gene="ZSCAN12"
/gene_synonym="dJ29K1.2"
/gene_synonym="ZFP96"
/gene_synonym="ZNF29K1"
/db_xref="GeneID:9753"
/db_xref="HGNC:HGNC:13172"
/db_xref="MIM:603978"
CDS 144..1958
/gene="ZSCAN12"
/gene_synonym="dJ29K1.2"
/gene_synonym="ZFP96"
/gene_synonym="ZNF29K1"
/codon_start=1
/product="zinc finger and SCAN domain containing 12"
/protein_id="AAH41661.1"
/db_xref="GeneID:9753"
/db_xref="HGNC:HGNC:13172"
/db_xref="MIM:603978"
/translation="MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREV
FRQYFRQFCYQETSGPREALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEEL
QAWVQEQHPESGEEVVTVLEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSM
SLQSMKAQPKYESPELESQQEQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMS
KSARCGETREPEEITEEPSACSREDKQPTCDENGVSLTENSDHTEHQRICPGEESYGC
DDCGKAFSQHSHLIEHQRIHTGDRPYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNE
CGKAFGRWSALNQHQRLHTGEKHYHCNDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCN
KSFSRRSILTQHQGVHTGAKPYECNECGKAFVYNSSLVSHQEIHHKEKCYQCKECGKS
FSQSGLIQHQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHTGERPYKCDKCGKAFTQ
RSVLTEHQRIHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKPYQCDECGKAFRQRK
KTSYKEILLKNHSEPQAGVNLLLSSLIPEWQSCFRRDL"
BASE COUNT 1227 a 795 c 909 g 1000 t
ORIGIN
1 gggtcccaaa agggttcgag gcctcttgcc ttcgctccgt aggagggagt tctcttctgg
61 ccctgggggc cgcaggactg tccaggaata cagtttccag gtgagatctt acttgaaaca
121 ccggtagttc tagcacagct aaaatggcat ctacttgggc tatccaggcc cacatggacc
181 aggatgaacc tttggaagta aagatagagg aagagaaata taccaccaga caggattggg
241 acctgcgtaa aaacaacacc catagcagag aggtcttccg tcagtacttc agacagttct
301 gctaccagga gacatctggt ccccgtgagg ctttgagccg actccgagaa ctttgccatc
361 agtggctgag gccagagacc cacaccaaag aacagattct ggagctgctg gtgctggagc
421 agttcctgac catcctacct gaggagctcc aggcctgggt gcaggagcag catccagaga
481 gtggggagga ggtggtgact gtgctggagg atttagagag agaactggat gaaccaggag
541 agcaggtctc agtccacact ggggaacagg aaatgttctt gcaggagacg gtacgtctac
601 gaaaagaagg agaacccagt atgtccctcc agtccatgaa agcccagcca aagtatgaat
661 ctccagaact tgaatcccaa caggagcaag ttttagatgt tgagactgga aatgagtatg
721 ggaatttaaa gcaagaagtt tctgaagaaa tggaaccaca tgggaagaca tccagtaaat
781 ttgaaaatga tatgtccaag tctgctaggt gtggagaaac tcgtgaacct gaagaaataa
841 cagaagagcc ctctgcttgc tccagagaag ataaacaacc tacctgtgat gaaaatggag
901 taagcctgac tgagaactct gaccatactg aacatcagag aatctgtcca ggagaagaat
961 cttacggatg tgatgactgt ggaaaagctt ttagtcagca ctcacacctc atagaacatc
1021 agaggatcca tactggagat agaccctaca aatgcgaaga atgtggaaaa gctttccgtg
1081 ggagaactgt gcttattcga cacaaaataa tacacactgg agagaaaccg tataagtgta
1141 atgaatgtgg caaagccttt ggccggtggt cagctcttaa ccaacatcag agacttcaca
1201 caggagaaaa acactatcac tgtaatgact gtggcaaagc ctttagtcag aaagcaggcc
1261 tctttcacca tatcaagatc cacacaagag acaaacctta tcagtgcact cagtgtaata
1321 aaagttttag tcggcgttcc atacttactc agcatcaagg agttcatacc ggcgccaagc
1381 cgtatgagtg caacgagtgt ggaaaagcct ttgtttataa ctcatccctt gtttcccatc
1441 aggaaatcca ccacaaagaa aaatgctatc agtgtaagga atgtgggaaa tccttcagtc
1501 agagtggcct tattcagcat cagagaattc acactgggga aaaaccctac aaatgtgacg
1561 tatgtgaaaa agcctttatt caaaggacaa gtcttacaga acatcagcga attcacactg
1621 gagaaagacc ctataaatgt gataagtgtg ggaaggcgtt tactcaaaga tcagtcctca
1681 cggaacatca gagaatccac actggagaga ggccctacaa gtgtgatgag tgtgggaatg
1741 ccttccgagg aatcaccagc ctcattcagc atcagagaat ccacactggg gagaagccct
1801 accaatgtga tgagtgtgga aaagccttca gacagaggaa gaagaccagc tacaaggaaa
1861 tacttctgaa aaatcactct gaaccccaag ctggagtgaa tcttctcctg agctctctca
1921 ttccagaatg gcaatcttgt ttcaggagag atctctaata gtgactgatg gtaaaggaag
1981 aaggctgtgc ctagaacaaa gaatcaggct ggcaaagaaa tcacaggtct ttcctcaaac
2041 tttaaattgc tactctctgg agatagctac ctggacttta cagagctgtc agaagacttg
2101 ggaaggtttg ccagcattgg aaaaagccac ttggacttca cagagctgtc agaagactta
2161 ggaagctttg ccagtagttc ctgagaccag aaatacatat tatgaagcag gtgctggaac
2221 aggccctggc ccctacttgt gaagctgcag atatagatgg tgttactgag aaggaaacta
2281 aggacttggc tccaaaacaa aacaaaacaa aatctggaga tgctgaattt tgttgggggg
2341 aatgtctgta gaactgcaac atcaatgcag taagtgtagt aaaagcttta gtttatggtg
2401 agtcattact cagcatcatg gagtccacga tgaagagaat ctcttttcaa tctgtgcaat
2461 caacaagttt ttgaaaggct tttgtttata gtggaaccct cttttccccc tagaagaacc
2521 accacaagga aaaatgctgt caccataagg aatgtgggaa agttttcagc cacatggcct
2581 tatttgactt caaagaatcc acatgagaga gagactgcat aaatgtaata actgaggagg
2641 cctttgttca gcaaagaaac cttatacaaa ctcgtataaa gaatgtagga agaccttcac
2701 ccagaagcca ggactgactg tgcaccagag aatctgcaca ataaacctga tgaatgtgga
2761 gatgcttgct tcagcattgg agaattcaca gtaaagggaa accctgccag tgtgatgagt
2821 acggaaaagt cttcagaggt tggaacttgg gaaaaatcag tgagtgaatt catattagag
2881 aggctcttat aaatgagagg attgtggaaa cttgtataga cagagatcag acctcaacaa
2941 gggagcctcc acagtattga aaagttaata taattaatgt aagtgggcaa gttgtatggg
3001 gaatgggtag tctaaattgc tcattttagc cagtaaaaac attaaattag tttcttagat
3061 caagaaaagg aaatgttaga agttattttt cccttccaga ggggtctata tgtgtaagca
3121 accaggactt ttgaaataag ttgcatctct ggatttgtga tctgtctcct ggatgattat
3181 ctctgttttg ggagacaggt attttttctt catgcctgct ctagtctcat ctcatatctt
3241 taattcattc agcaagtata cacaatagta ttatcgtcta ctgtttgttg taaatatata
3301 tatattattt tctttttggt ctgagtaggc ttgtattggt accctaggac ataaaaatca
3361 catatatcat gtttcagtaa atgcagtgaa aggaactata ttattaaatt gctgggaatt
3421 tctgtaaatt tgagactacc tttatattct ccaacacaag accgtgtagg tgtcccttca
3481 gagagtatat ttttctagct tggcttcttt attttcttta tttttttgag atggagtctt
3541 gctcctgtcg cccaggctgg agtgcaatgg cacgatctcg gctcactgca acctccgcct
3601 cccaggttca agtgattctc ctgtctcagt ctcccgagta gctgggatta caggcacttg
3661 ccaccattcc cagctaattt ttgtattttt agtagagacg gggtttcacc atgttggcca
3721 ggctggtctc gaactcctga ccttgtgatc tgcccacctt ggcctcccaa agttcaggga
3781 ttacaggcat gagccaccat gcccggctgt tttttttaag atagaaaaat atacttcatg
3841 tatagcctat tgacagataa tgactgatat tttttcttat agataacaca taataaacat
3901 tgtgaagact aaaaaaaaaa aaaaaaaaaa a
//