LOCUS BC041590 2395 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens bromodomain containing 9, mRNA (cDNA clone MGC:52166 IMAGE:5428011), complete cds. ACCESSION BC041590 VERSION BC041590.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2395) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2395) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 44 Row: i Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 57770649. FEATURES Location/Qualifiers source 1..2395 /db_xref="H-InvDB:HIT000052566" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:52166 IMAGE:5428011" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..2395 /gene="BRD9" /gene_synonym="LAVS3040" /gene_synonym="PRO9856" /db_xref="GeneID:65980" /db_xref="HGNC:HGNC:25818" CDS 202..1647 /gene="BRD9" /gene_synonym="LAVS3040" /gene_synonym="PRO9856" /codon_start=1 /product="bromodomain containing 9" /protein_id="AAH41590.1" /db_xref="GeneID:65980" /db_xref="HGNC:HGNC:25818" /translation="MKGYQSLVFNFFFLKLSAENESTPIQQLLEHFLRQLQRKDPHGF FAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRP DTVYYKLAKKILHAGFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREV ISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSL LYSVVNTAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSATTALSM QNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGG DHSRTLFQLKQRRNVPMKPPDEAKVGDTLGDSSSSVLEFMSMKSYPDVSVDISMLSSL GKVKKELDPDDSHLNLDETTKLLQDLHEAQAERGGSRPSSNLSSLSNASERDQHHLGS PSRLSVGEQPDVTHDPYEFLQSPEPAASAKT" BASE COUNT 598 a 589 c 683 g 525 t ORIGIN 1 ggaagagaag aagcggaagc gagagaggga gcactgtgac acggagggag aggctgacga 61 ctttgatcct gggaagaagg tggaggtgga gccgccccca gatcggccag tccgagcgtg 121 ccggacacag ccagttctcg gtggaactta aaatgctgtg agacaccaga cagacagata 181 ctgtgaactt ggagctctct aatgaaggga taccaaagtc ttgtattcaa tttttttttc 241 cttaaattgt cagccgaaaa tgagagcaca cctattcagc aactcctgga acacttcctc 301 cgccagcttc agagaaaaga tccccatgga ttttttgctt ttcctgtcac ggatgcaatt 361 gctcctggat attcaatgat aataaaacat cccatggatt ttggcaccat gaaagacaaa 421 attgtagcta atgaatacaa gtcagttacg gaatttaagg cagatttcaa gctgatgtgt 481 gataatgcaa tgacatacaa taggccagat accgtgtact acaagttggc gaagaagatc 541 cttcacgcag gctttaagat gatgagcaaa caggcagctc ttttgggcaa tgaagataca 601 gctgttgagg aacctgtccc tgaagttgta ccagtacaag tagaaactgc caagaaatcc 661 aaaaagccga gtagagaagt tatcagctgc atgtttgagc ctgaagggaa tgcctgcagc 721 ttgacggaca gtaccgcaga ggagcacgtg ctggcgctgg tggagcacgc agctgacgaa 781 gctcgggaca ggatcaaccg gttcctccca ggcggcaaga tgggctatct gaagaggaac 841 ggggacggga gcctgctcta cagcgtggtc aacacggccg agccggacgc tgatgaggag 901 gagacccacc cggtggactt gagctcgctc tccagtaagc tactcccagg cttcaccacg 961 ctgggcttca aagacgagag aagaaacaaa gtcacctttc tctccagtgc cactactgcg 1021 ctttcgatgc agaataattc agtatttggc gacttgaagt cggacgagat ggagctgctc 1081 tactcagcct acggagatga gacaggcgtg cagtgtgcgc tgagcctgca ggagtttgtg 1141 aaggatgctg ggagctacag caagaaagtg gtggacgacc tcctggacca gatcacaggc 1201 ggagaccact ctaggacgct cttccagctg aagcagagaa gaaatgttcc catgaagcct 1261 ccagatgaag ccaaggttgg ggacacccta ggagacagca gcagctctgt tctggagttc 1321 atgtcgatga agtcctatcc cgacgtttct gtggatatct ccatgctcag ctctctgggg 1381 aaggtgaaga aggagctgga ccctgacgac agccatttga acttggatga gacgacgaag 1441 ctcctgcagg acctgcacga agcacaggcg gagcgcggcg gctctcggcc gtcgtccaac 1501 ctcagctccc tgtccaacgc ctccgagagg gaccagcacc acctgggaag cccttctcgc 1561 ctgagtgtcg gggagcagcc agacgtcacc cacgacccct atgagtttct tcagtctcca 1621 gagcctgcgg cctctgccaa gacctaactc tagaccacct tcagctcttt tattttattt 1681 ttttagtttt attttgcacg tgtagagttt ttgtcatcag acaaggactt tgatcctgtc 1741 ccctttggca tgcgggaagc agccgcgggg aggtaatgaa ttgtctgtgg tatcatgtca 1801 gcagagtctc caagccccac gaaccctgag gagtggagtc atacgcgaag gccatatggc 1861 catcgtgtca gcagagagag tctctgtaca cagccccgtg aaccctgagg agtggagtca 1921 tacacgaagg gcgtgtggcc atcgtgtcag cagagagagt ctctgtacac agccccgtga 1981 accctgagga gtggagtcat acgcgaaggg tgtgtggcca ggctgcagag ctgcgtgccg 2041 tttgtgtccg agcatcacgt gtggctccag cccttgtttc tgccagtgta gacacctctg 2101 tctgccccac tgtcctgggg tcgctcttgg gaggcacagg catgggtgtg tctggcctca 2161 ttctgtatca gtccagtgtg ttcctgtcat agtttgtgtc tcccaggcag gccatggtag 2221 gggcctcgca ggggccattg gggagcacag ggccaggctg gggtgaggag agctcccctg 2281 ttttctgttt aattgatgag cctgggaaag gagtgtgttc tgcctgcccg ttacagtgga 2341 gcgttccgtg tccataaaac gttttctaac tgggaaaaaa aaaaaaaaaa aaaaa //