LOCUS BC040517 2891 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens post-GPI attachment to proteins 1, mRNA (cDNA clone
IMAGE:5297977), containing frame-shift errors.
ACCESSION BC040517
VERSION BC040517.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2891)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2891)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62865856
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..2891
/db_xref="H-InvDB:HIT000096199"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5297977"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 857 a 538 c 519 g 977 t
ORIGIN
1 gctggggctc ggctccgggg gtggcggtcg gacagtgtct agcacgctca gtccgggctt
61 ggggccccgc ggcggagaag gaggtagagg gggcggcggc ggcggcggcg gtggtggcgg
121 caccatgttt cttcactcag ttaatctctg gaacctggcg ttttatgtct tcatggtctt
181 tctggcaacc ctggggctgt gggatgtctt cttcggcttc gaggagaata agtgcagtat
241 gagctacatg tttgagtacc cggagtatca gagttcagca gtgcctaaga cctgggtctc
301 aacagaccac ctctccattg tgtggtgtaa acaattgcag ttgactacag ttcgagcatt
361 ctttgatctt attgatgctg atactaaaca aataactcaa aattccaaga agaaactgtc
421 agttttgtat caccacttta taagacaccc atcaaaacat ttgaggaaaa tccagctata
481 atttctgact taacagggac atctatgtgg gttctagtaa aagtgtccaa atggacctat
541 gtagcttaca acgaatctga gaagatatat tttacatttc ctcttgaaaa tcatagaaaa
601 atctacactc atgtctattg tcagagcact atgctggata caaatagttg gatttttgct
661 tgcataaaca gcacttctat gtgcctgcaa ggggttgatt tatcatggaa agctgaactg
721 ctgccaacaa ttaagtatct gacattaaga cttcaagact atccatcttt gtctcatctt
781 gttgtttatg taccatctgt tcgtggaagt aagtttgttg tagattgtga attctttaaa
841 aaagagaaaa gatacataca gcttcctgta actcatcttt tttcctttgg attgtcttca
901 aggaaagtgg tgttaaatac aaatggccta tactacaatc tagagcttct gaactttgga
961 cagatatacc aagcttttaa aatcaacgtg gtaagcaagt gctcagcagt caaagaagaa
1021 ataaccagta tctatagact tcatattcct tggtcttatg aagattcact aaccattgca
1081 caggctccat cttccacaga aatttctctg aaactccata ttgctcaacc agaaaacaat
1141 acccatgtgg cattatttaa aatgtacacg tcatcagact gtcggtacga ggtgacagtt
1201 aagacttcct tttcacaaat acttggacag gtagttagat ttcatggtgg agctcttcct
1261 gcttatgtcg tatctaatat ccttcttgct tatagaggac agttatattc tcttttctca
1321 acaggttgtt gcttagaata tgctaccatg ttggataaag aagccaaacc atacaaagtt
1381 gatccttttg taattatcat taagtttctg ttggggtaag ttttattatc tgtgataatg
1441 attttaattg tgttttacat gtaacattat atttggttcc ataatgcaat ataaattttc
1501 atacagattt ggcagttgac ttgtttcatt aaatgaggtt ttttttttct cttaggcaaa
1561 ggtctaataa gtatatcaat gtctacttca atagtatcat ttcaaaagta attattcact
1621 ttatgtatat cagtctaaac ttagactgcc tttaatgttt gtaaataggt gtatatggtc
1681 catgatctgt gagtatccta gattcaaacg caaatcatta cagggtattg atgaaacagt
1741 gcctctctga tcacttttaa aagtatattt tagacctctc taccctagtt aacattccat
1801 tcttaattta gtcacatttt cagatttttg gttaagcatc aatatgtaga tctttttttc
1861 catcattaca actaacttgg ctttctaaaa aaaaaaaaaa aaagaacata ttactttcta
1921 ctagtatcaa tatagattag taaagctata ctgaaatgca gatcttcaaa gatcagtagg
1981 ctcacttgga aaataaatga cttgttccat acaaagaatt aaaaatttgt ttttcagtat
2041 aattataaat taagtatcat ggaactttag agactctctt gaatagtcag acacctcaaa
2101 tattaagtcc ttaaatttca gttgttgggt tttttgcttt tatattttct tttctccaca
2161 ggtataaatg gtttaaagaa ttgtgggatg tattattgtt accagaatta gatgccgtca
2221 ttttaacttg tcagagtatg tgtttccccc tgatatcctt gattctcttt ctgtttggaa
2281 cgtgtactgc ctactggagt ggcctactgt cttctgcatc tgtgagactt ctttcttcat
2341 tgtggctagc tttgaaaaga ccctctgaac ttcctaaaga tatcaagatg atatcaccag
2401 acttgccctt tttgacaatt gtcttgatca tagttagttg gacaacttgt ggagcactag
2461 ccatacttct ttcttatctt tactatgtgt ttaaggttgt tcatctgcaa gccagcttaa
2521 caacttttaa gaatagccag cctgtgaatc ccaaacactc tagaagaagt gaaaagaaat
2581 ccaatcatca taaagactcc tcaatacacc atcttcgttt atctgccaac gatgctgaag
2641 atagccttcg catgcacagt actgtgatta acttactaac atggattgta ttactcagca
2701 tgccttctct aatttattgg ctaaagaatc ttaggtatta ttttaaactt aatcctgatc
2761 catgtaaacc tttggcattt atccttattc cgactatggc aattcttgga aatacttaca
2821 ctgtttcaat aaaatcaagt aaattgttga agactacttc acaatttcca cttaaaaaaa
2881 aaaaaaaaaa a
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