LOCUS BC040009 4295 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ST6 beta-galactosamide alpha-2,6-sialyltranferase 1,
mRNA (cDNA clone MGC:48859 IMAGE:5557868), complete cds.
ACCESSION BC040009
VERSION BC040009.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4295)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4295)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: g Column: 24.
FEATURES Location/Qualifiers
source 1..4295
/db_xref="H-InvDB:HIT000052298"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48859 IMAGE:5557868"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4295
/gene="ST6GAL1"
/gene_synonym="CD75"
/gene_synonym="MGC48859"
/gene_synonym="ST6Gal I"
/gene_synonym="ST6GalI"
/db_xref="GeneID:6480"
/db_xref="HGNC:HGNC:10860"
/db_xref="MIM:109675"
CDS 311..1531
/gene="ST6GAL1"
/gene_synonym="CD75"
/gene_synonym="MGC48859"
/gene_synonym="ST6Gal I"
/gene_synonym="ST6GalI"
/codon_start=1
/product="ST6 beta-galactosamide
alpha-2,6-sialyltranferase 1"
/protein_id="AAH40009.1"
/db_xref="GeneID:6480"
/db_xref="HGNC:HGNC:10860"
/db_xref="MIM:109675"
/translation="MIHTNLKKKFSCCVLVFLLFAVICVWKEKKKGSYYDSFKLQTKE
FQVLKSLGKLAMGSDSQSVSSSSTQDPHRGRQTLGSLRGLAKAKPEASFQVWNKDSSS
KNLIPRLQKIWKNYLSMNKYKVSYKGPGPGIKFSAEALRCHLRDHVNVSMVEVTDFPF
NTSEWEGYLPKESIRTKAGPWGRCAVVSSAGSLKSSQLGREIDDHDAVLRFNGAPTAN
FQQDVGTKTTIRLMNSQLVTTEKRFLKDSLYNEGILIVWDPSVYHSDIPKWYQNPDYN
FFNNYKTYRKLHPNQPFYILKPQMPWELWDILQEISPEEIQPNPPSSGMLGIIIMMTL
CDQVDIYEFLPSKRKTDVCYYYQKFFDSACTMGAYHPLLYEKNLVKHLNQGTDEDIYL
LGKATLPGFRTIHC"
BASE COUNT 1078 a 1068 c 1001 g 1148 t
ORIGIN
1 gaggaggttc ctgtagggcg gcacaaccag ggagggcgtg gaagctctgc atcccttctc
61 ccataccttg ctctacacat ctcttcatct gtatcctctg cagcatcctt gatgataaac
121 cagtaaatat gagttttgat catcctgaga aaaatgggcc ttggcctgca gacccaataa
181 accttccctc ccatggataa tagtgctaat tcctgaggac ctgaagggcc tgccgcccct
241 gggggattag ccagaagcag gcttgttttc ctgctcagaa caaagtgact tccctgaaca
301 catcttcatt atgattcaca ccaacctgaa gaaaaagttc agctgctgcg tcctggtctt
361 tcttctgttt gcagtcatct gtgtgtggaa ggaaaagaag aaagggagtt actatgattc
421 ctttaaattg caaaccaagg aattccaggt gttaaagagt ctggggaaat tggccatggg
481 gtctgattcc cagtctgtat cctcaagcag cacccaggac ccccacaggg gccgccagac
541 cctcggcagt ctcagaggcc tagccaaggc caaaccagag gcctccttcc aggtgtggaa
601 caaggacagc tcttccaaaa accttatccc taggctgcaa aagatctgga agaattacct
661 aagcatgaac aagtacaaag tgtcctacaa ggggccagga ccaggcatca agttcagtgc
721 agaggccctg cgctgccacc tccgggacca tgtgaatgta tccatggtag aggtcacaga
781 ttttcccttc aatacctctg aatgggaggg ttatctgccc aaggagagca ttaggaccaa
841 ggctgggcct tggggcaggt gtgctgttgt gtcgtcagcg ggatctctga agtcctccca
901 actaggcaga gaaatcgatg atcatgacgc agtcctgagg tttaatgggg cacccacagc
961 caacttccaa caagatgtgg gcacaaaaac taccattcgc ctgatgaact ctcagttggt
1021 taccacagag aagcgcttcc tcaaagacag tttgtacaat gaaggaatcc taattgtatg
1081 ggacccatct gtataccact cagatatccc aaagtggtac cagaatccgg attataattt
1141 ctttaacaac tacaagactt atcgtaagct gcaccccaat cagccctttt acatcctcaa
1201 gccccagatg ccttgggagc tatgggacat tcttcaagaa atctccccag aagagattca
1261 gccaaacccc ccatcctctg ggatgcttgg tatcatcatc atgatgacgc tgtgtgacca
1321 ggtggatatt tatgagttcc tcccatccaa gcgcaagact gacgtgtgct actactacca
1381 gaagttcttc gatagtgcct gcacgatggg tgcctaccac ccgctgctct atgagaagaa
1441 tttggtgaag catctcaacc agggcacaga tgaggacatc tacctgcttg gaaaagccac
1501 actgcctggc ttccggacca ttcactgcta agcacaggct cctcactctt ctccatcagg
1561 cattaaatga atggtctctt ggccacccca gcctgggaag aacattttcc tgaacaattc
1621 cagcctgctc cttttactct aggggcctct gtcagcaaga ccatgggggc ttcaagagcc
1681 tgtggtcagg aaatcaggtc cagccttccc tgtagccaga cagtttatga gcccagagcc
1741 tcctgccaca cacatgcaca catatctagc attctttcca gacagcatcc tccccgcctt
1801 ccaccttggt agatgcaagg tctatctctc ccatcagggc tgccaaagct gggctttgtt
1861 tttcccagca gaatgatgcc attctcacaa accaatgctc tatattgctt gaagtctgca
1921 tctaaatatt gatttcacgt tttaaagaaa ttctcttaaa ttacaattgt gcccaatgca
1981 gggtggctct ggggggcaag taggtggtac aggggattgg aaacatgctc cgcgcctcca
2041 gagaaaagtt gctcccgagg tccatgcccc tggaacgtgt tcctatcact ctggctggtt
2101 gggctggtcc ttagactggg tgcttatgat taaagggtct tggttagccc actttccctc
2161 tccatgtgga gatggaaggt agagaaggat acagtgtcta tcctcaagtt gctacggttc
2221 agtgagagag gcagacatct gaacaggcag gtaggattca gtgtgctcag tgcactgggg
2281 atttggagag agatgggctt gctctctctg tgcacccagg agggccacgc acttaaaact
2341 gtgtttgtgg atcagagaag gctttatagc acagggggca ttcagatgag tcttagagga
2401 agagaagaaa catggcaagc agattacatc tgagccgttt gaattgtgtt tttctttctt
2461 cccatgttta ttttctaaga tctacctgaa cttagagact caagatattt ttttaggaaa
2521 cctcctaccc atgtctgagg tagcaagtgc agcctcacga cagataccag gcaatccaga
2581 gccacaaaac gtgattcctc caggctctgc ctggcctgac cctgtcctgt cagctgggtt
2641 tacataccag tcccattctt ccttttcaat acctaccccc aaatcttctc ctaaccacca
2701 tctgtttttt ttttttaaag cattttttgc tttaaaagca tcctgacccc aatttctttg
2761 agctcacggg ccttttgctg aaggtctctc agggtgtagt ggtgtggctc tctggactta
2821 acgtcactct cagaggtcag aaccttggag atcagaactg attctcacca ggtgtgagag
2881 gtgtggtagc agattgcaat gctctgcacc tcttccttgc aagtgagcaa cttcaggctc
2941 tctgggcaga ggctggccca ctgtagtttg cagacatgct ctccagatgg ttttactaag
3001 tcccctctcc ctgataggga atcctgctgg accagcgcag ccctggtgtg gagaggttaa
3061 aagacttgca caggatcacc aagtcatgct gtagagccag gattcctaga cccagggctc
3121 tgcactctca aggctggccc catgtgctca agggggtcta atgtttgggc tccaaactaa
3181 ccatctcgga gctgggctcc tcatttactg ccaaaccctc agcttatgta gctagaaagg
3241 gccctggagt gagaaagcct ggattttcaa attgatgctc ccctactgac tagctgtgcc
3301 actctgggca aatgctcttc cttgagcctg tttccacacc tgtaaagtgg ggatgatgat
3361 cctatctcac tgcttttgtg aggattacag gaaagcacct gtcctggctc tgtacctggc
3421 acgtagtagg tgctcagttc atgctggttt ccttcctgcc tttagtaggg acctgctctg
3481 tgctcacacc tcggctgcat gcaccctgct gtgacggagg ctagtgtgga agaggtcctg
3541 tcctcaggga attaactgtc ttattgggag acaacaactg tcctccttgg aacacccaag
3601 aaaccatgca aagcagtgga caacacagaa cacgccctcc tcctcgctgc ctgcagctcc
3661 aatctgattc tgcttgggaa tgggcggagc acgtgggctg cttaactgct gtataggaca
3721 agccccttac ccctctctgg gcccatgaat tcctggcttg gtttatgttc tgatttgaca
3781 cactgatttt aatcttcgaa tcatgacact gagtgcagag gaggtggcat tccgacagca
3841 ggacatacat gttggtgtga agactgggac gacactgggt agaatctagt ttttaattat
3901 tattaatata aaggatcaaa ttaatttaaa tatgattctg aagtctacag aacttttagt
3961 tctgtgctgt ctatgtggac actttggtaa aatgcaaatt atgatatgga cgttatcatt
4021 ggtctggtga gatgtttcat atttgtgaca gttaatttaa aaattatgac ttaatgctgc
4081 ctgtgtctat ggggttctgt cttctttgat agccatctat tcatctggat catgggaccc
4141 tctctaatcc ttccaccaat caaataagct attgctattg gtttggagtt gagatatcag
4201 tctcggaaac ttctgaaaaa tgctaataat tacccaagga ttatgtcaaa ttttaaaata
4261 aatgtgtgtg tgtttcttta aaaaaaaaaa aaaaa
//