LOCUS BC039708 1700 bp mRNA linear HTC 17-NOV-2006 DEFINITION Homo sapiens FYVE, RhoGEF and PH domain containing 4, mRNA (cDNA clone IMAGE:5194873), with apparent retained intron. ACCESSION BC039708 VERSION BC039708.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1700) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1700) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 82 Row: d Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21245127 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..1700 /db_xref="H-InvDB:HIT000095885" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5194873" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 581 a 354 c 365 g 400 t ORIGIN 1 ggagcacaaa gacagcgatt gttacccaat aagcagtagt cacacacttc taccaatcgc 61 cttaggaggg ctggttacca tggaatccac catctgttca ctccccaccg gaatgtgatt 121 atccttgctg ggctgggaag tggggaaagc aggggagcct gtgctgggtg agattatctg 181 caatggaccg ggttaatggg aggcttgctt tggctcgctg gaagaacaaa tgaagggagt 241 tttacttcaa ccatttgtga cttctggcca agaggaataa attcagcttt tataaggcag 301 cagtacctgt ccaaagatcg ctttagttcc accttgctcc acaagcagca caaccacact 361 ggttggtgag aatgtatctg aagaagaggc tcagggaata aatgggaaca ggccagcaaa 421 acactcagct gcaagtccaa agccacaagt gcctccaaag ccattacacc tgcagaattc 481 accttcgtcc aatatacacc aaacccccag gcataaagct ttacctagtg caaaaccaag 541 gatggaggaa attaaacctg cctctgcttc ttgtgtctca aaagaaaaac ccagtaaggt 601 atcagatctc atcagtcgct ttgaaggagg cagctcatta tcaaattata gtgatttgaa 661 gaaagagtct gctgtgaacc taaatgctcc tagaacccca ggaaggcatg gattgacaac 721 cacacctcaa caaaaactcc tctcccagca cttgccacag aggcagggaa atgatacaga 781 taagactcag ggtgcacaga cttgtgtggc caacggtgta atggcagcac aaaaccagat 841 ggaatgtgag gaggagaaag ctgccactct tagctcagat acttctattc aagcttctga 901 acccttgctt gatacgcaca tagtgaatgg agaaagagat gaaactgcca cagctcctgc 961 atcacccaca acagacagct gtgatggaaa tgcttctgac agtagctaca ggactccagg 1021 cataggccca gtgctccccc tagaagaaag aggggcagaa acagaaacca aggtacaaga 1081 gagggaaaat ggggaaagcc ctctggaact ggagcagctg gaccagcacc atgagatgaa 1141 ggtagagcat gagactagct catgagcagg gaaaaccctg cctattcgat tgttgtctta 1201 aaactcttta tttattgcac ccctgaaatg tatgaatcag atcacccaca ctggcagtta 1261 aacgattttc aagctctggc tgctgattag catttcccct atgctctaag cagatatttc 1321 actttttctt ttcatgtagt ttctgttaat atctctgttg taatttcagg agtcagaaca 1381 gtgtggaaac tttaatatag gaaatccaca aatgtattgt ttttacatag aaagaaaatg 1441 ttccttgttg ctctagatgt tggtgctgta tccctaatac ttacgggcca agcaagaaga 1501 aattgtataa tctttgttgt tcagaagttt ctaatagaat aaataggcct gtaagatgaa 1561 cttgccacta gtaaatgtta cttttaagga catgaatatg gaagtattaa attattcaac 1621 agattataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1681 aaaaaaaaaa aaaaaaaaaa //