LOCUS BC039594 1580 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens actin related protein 2/3 complex, subunit 1A, 41kDa,
mRNA (cDNA clone MGC:48820 IMAGE:6018804), complete cds.
ACCESSION BC039594
VERSION BC039594.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1580)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1580)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 84 Row: n Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22907051.
FEATURES Location/Qualifiers
source 1..1580
/db_xref="H-InvDB:HIT000095831"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48820 IMAGE:6018804"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1580
/gene="ARPC1A"
/gene_synonym="Arc40"
/gene_synonym="SOP2Hs"
/gene_synonym="SOP2L"
/db_xref="GeneID:10552"
/db_xref="HGNC:HGNC:703"
/db_xref="MIM:604220"
CDS 125..1237
/gene="ARPC1A"
/gene_synonym="Arc40"
/gene_synonym="SOP2Hs"
/gene_synonym="SOP2L"
/codon_start=1
/product="actin related protein 2/3 complex, subunit 1A,
41kDa"
/protein_id="AAH39594.2"
/db_xref="GeneID:10552"
/db_xref="HGNC:HGNC:703"
/db_xref="MIM:604220"
/translation="MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVK
AHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFV
KWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAG
SCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSR
LAWVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDD
RGCLTFVSKLDIPKQSIQRNMSAMERFRNMDKRATTEDRNTALETLHQNSITQVSIYE
VDKQDCRKFCTTGIDGAMTIWDFKTLESSIQGLRIM"
BASE COUNT 417 a 390 c 392 g 381 t
ORIGIN
1 gtcctccgcc cgcgcccgac ggagcctgtt cgcgtcgact gcccagagtc cgcgaatcct
61 ccgctccgag cccgtccgga ctcccccgat cccagctttc tctcctttga aaacactaag
121 aataatgtca ctgcatcagt ttttactaga gccaatcacc tgtcatgcct ggaacaggga
181 tcgtactcag attgccctca gtcccaataa tcacgaagtg cacatctata agaagaacgg
241 gagccagtgg gtgaaagctc atgaactcaa ggagcacaac ggacacatca caggtattga
301 ctgggctccc aagagcgacc gcattgtcac ttgtggggca gaccgcaatg cctatgtctg
361 gagtcagaaa gatggtgttt ggaagccaac cctggtgatc ctgagaatta atcgcgcagc
421 tacttttgtg aagtggtccc ccctagagaa caaatttgct gtgggaagtg gagcacgact
481 catttctgtt tgttactttg agtctgaaaa tgactggtgg gtgagcaagc acattaaaaa
541 gccgattcgc tccacagtcc tcagcttgga ttggcatccc aacaacgttt tgctggcagc
601 aggatcatgt gacttcaaat gcagagtgtt ttctgcctac attaaagaag tggatgaaaa
661 gccagccagc acgccctggg gcagcaagat gccttttggg cagctgatgt cagagtttgg
721 tggcagtggc actggtggct gggtccacgg ggtaagcttc tctgccagtg ggagccgcct
781 ggcctgggtc agccacgaca gcaccgtgtc tgttgctgat gcctcaaaaa gtgtgcaggt
841 ctcgactctg aagacagagt tcctgccgct cctaagtgtg tcatttgtct cagagaacag
901 cgtcgtggct gctggccatg actgctgccc aatgctcttt aactacgatg accgcggctg
961 cctgaccttc gtctccaagt tagatattcc aaaacagagc atccaacgca acatgtctgc
1021 catggaacgc ttccgcaaca tggacaagag agccacaact gaggaccgca acacggcctt
1081 ggagacgctg caccagaata gcatcactca agtctctatt tatgaggtgg acaagcaaga
1141 ttgtcgcaaa ttttgcacta ctggcatcga tggagccatg acaatttggg atttcaagac
1201 cctcgagtct tccatccagg gcctccggat aatgtgaagc tgagtgagcc tccgccatcc
1261 agcatgacaa actgtggccg accgcagctg tgccgtggca cgatggcgag gaagccagcc
1321 ccaaggaaac actgaaaaca catatcacgc caatgccgtg tggttttgtt tgaatataaa
1381 attggtgaaa gtgttggttt ttttaaggca gtaatttttt tgtttgtttt tttgcgattt
1441 cattccattc ttgaccaaag cttctcttta agtagtttat tatggaaaat tgtcacacta
1501 acttaaaaga cagggtgagg gagatatgta aattgtccac tagaaaatta aataaaagaa
1561 ctgaaaaaaa aaaaaaaaaa
//