LOCUS BC039249 3981 bp mRNA linear HUM 26-JUN-2008
DEFINITION Homo sapiens zinc finger, CCHC domain containing 24, mRNA (cDNA
clone IMAGE:5278268), partial cds.
ACCESSION BC039249
VERSION BC039249.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3981)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3981)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23503314.
FEATURES Location/Qualifiers
source 1..3981
/db_xref="H-InvDB:HIT000095564"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5278268"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3981
/gene="ZCCHC24"
/db_xref="GeneID:219654"
/db_xref="HGNC:HGNC:26911"
CDS <1..908
/gene="ZCCHC24"
/codon_start=3
/product="ZCCHC24 protein"
/protein_id="AAH39249.1"
/db_xref="GeneID:219654"
/db_xref="HGNC:HGNC:26911"
/translation="GGEAAAAAAAAGSARGAGRGAITVGAREAGSGHRLPGARPSAAE
GGRERAAGEGPAPPPQNEPAVGHRHERRLGVPARPAAQLGLPVAAGHAPASAFDAFRP
EPTAGTAPPELAFGKGRPEQLGSPLHSSYLNSFFQLQRGEALSNSVYKGASPYGSLNN
IADGLSSLTEHFSDLTLTSEARKPSKRPPPNYLCHLCFNKGHYIKDCPQARTKGEGLT
PYQGKKRCFGEYKCPKCKRKWMSGNSWANMGQECIKCHINVYPHKQRPLEKPDGLDVS
DQSKEHPQHLCEKCKVLGYYCRRVQ"
BASE COUNT 890 a 1128 c 1095 g 868 t
ORIGIN
1 agggggggga ggcggcggca gcggcagcgg ctgcgggcag cgcgcggggc gcagggcgcg
61 gggcgatcac cgtcggggct cgggaggcgg gcagtgggca caggctcccc ggtgcccgcc
121 cctccgctgc ggaggggggc cgcgagcggg cggccgggga ggggccggca ccgccgccac
181 aaaatgagcc tgctgtcggc catcgacacg agcgccgcct cggtgtacca gcccgcccag
241 ctgctcaact gggtctacct gtcgctgcag gacacgcacc ggctagcgcc ttcgatgcct
301 tccggccaga gccgaccgcc ggcacagcac ccccggagct ggccttcggc aagggccgcc
361 ccgagcagct gggctcgccc ctgcactcca gctatctcaa cagcttcttc cagctgcagc
421 gcggagaggc gctgagcaac agtgtgtaca agggcgcctc accctatggc tccctcaaca
481 acatcgccga tggcctcagc tccctcaccg agcacttctc agacctgacc ctcacctccg
541 aggctcgcaa gcccagcaag cggcccccac ccaactacct gtgccacctg tgcttcaaca
601 aaggacacta catcaaggac tgcccccagg cacgcaccaa aggcgagggc ctgactccat
661 accagggcaa aaagcgctgc ttcggcgagt acaagtgtcc caagtgcaag agaaaatgga
721 tgagcgggaa ctcctgggcc aacatggggc aggagtgcat caagtgccac atcaacgtgt
781 atccacacaa gcagagaccc ctggagaagc ccgacggcct ggacgtgtcc gaccagagca
841 aggagcaccc gcagcacctc tgcgagaagt gcaaggtcct gggctactac tgccgtcgcg
901 tgcagtgacg ggctgcccgc ccgcacccag agccaccccc gccagcccga ggagacgctg
961 cttccctgtg ctactccaag gggctgcgtg tcgcactgtg catggggtgc cctcgcaggc
1021 ctgcggggct gggccggggg ctcttagcgt ccttgtcttg tgtgtgttga caaacagtgt
1081 tactgacatt gctgcccccc acaggccagg gaaagcaggg agtctggggc tttttgcagg
1141 cgggcctggg gtctcagtgg aggggacaaa ggcaagcaaa agcccatgtc caggagccct
1201 gggtgtcccc acaggctcgc ctctgagagc ctctttgggg tgagcagcct tgtattggcc
1261 acaggtgcac taaattgact gtgaatccca aacctcccca gaccagccag gccgcctgcc
1321 cccacccaga accttccggt ttgccctgta tggaaagcca ctctgggaaa tccctctttc
1381 ctgagtcagc aatcgtggca aggggacatg tgttccaaca gcggctgggg agtggacctc
1441 tctgtccctt gcccacctta agccccaaat ccagaccccc tctgacatca ctggcattgc
1501 acctgggtgt gcccccctcc ccacgctatg gacccagata ggaggggtta ggcatggggg
1561 aggcacagaa tgctggagag atgcgtcctg gtgaacgtgg ggcagcccct cccacgaccc
1621 ccaccagact gccttaggtt ttgtcagccc cactcccttt ccttcccctc tgcctcccac
1681 ccactctggg ggtccacatc aagatagctg ggcccagtgt ggaagcccag cgtgtctgtt
1741 ctagcagaaa ggacacaagc ctggtgttct ggagacctcg gctcaagtct ttgccctgct
1801 gccgacgcat tgtgtcacat tgggcaagga cttcgcatct ccaggcctca gtttccccat
1861 tagttaaatg acagcataac actagagagc agagggccca tttcagctct gttgttctgg
1921 gattcaggct ggccggtgct gtgtcctgga gctttatttg gggagtttca cccagaatgg
1981 tgggagaaac ctcccaggtg ccaggtaccc cgcatcgtga cccttcactt ggtgtcttag
2041 gaagtcaagc tgagggatgc tgagtcctcc cctgctggcc cctgcagccc cagccctgct
2101 tttcatcccc cacccctgca aacatggagg ggccccctcc ttctcacctc ggtctcctag
2161 cccctgacat ggagaaccct gagacaagcc acagaacccc tcttttctaa aatggagaca
2221 ataatttcct acctcccaag ggagcagaga ggcctcgtgg cacgtccgtg gccagggagc
2281 ccactgtcct ggctggcggc gggatcgtgc actcctctgt ctcccggatg agaagccccg
2341 tttccatggt cttgaccctt cctttctccc ggctgtcaga actgggtctc ttgattttgc
2401 ccctacatta tgcctctgtg ggaaaaaaaa aaaaatcaga ccaagaaatg agcctgaaat
2461 tcagtgttta ccatggctca aggatgccca tctggtgtcc agttgccttt tgtattcaaa
2521 tgaaaatgct ttgtacaact gaggagttac agtgaagtgt taaccagggg tccagggagc
2581 gagttgaaaa gatggagtga gtgtatttgc agccagggag ctgcagggtg gatttgaggg
2641 gccataccct ctgagcactt aaaaaaggta tttgctccag gccaggcagc aggctgtgga
2701 cacccttgcc accactgggg actgccactg aggactcccc gagcacgttg ttccccgtct
2761 tctccaaggt gttgaggtga gctggggttg gccccggccc aggcttctgt cccaaggaga
2821 agctgccact gacagtcatc ctaccgcact gctaaagaga atgttcgcag tggtgggcgg
2881 cgtgcctgtg ccaacccttc cagggacccg gccatggggg accttggccc aaggatgcct
2941 ggggcctgcc agctgtgctg caaaggtggg gggcccacac cctaaaacta acccaggccc
3001 cagaccactg gaggccaggg cttccctgca cgggctaagg ggagttggga tatcacccca
3061 aagtgacctt gccagtgagc tgttcagcag gtagccactg ccctgccatc tgtgcagagc
3121 cagccacctt gggggctggg gttccagctt tgaggcccac cttccatact ccccttgact
3181 cggctctggc tgaactgggg aactctcttg tggtcagcaa agcccctgcc atgcaggcca
3241 ggtgccattg agaattaagt gctcagaggg ccaggagccc aggggatggg aaagtgtgtg
3301 gttttagtac gttcaaaagg gacaatcgct tgcagttggt agatctagcg atctagttgg
3361 gagataatgg tgtttacccc atatgaagta ttcaatagtt ctacttgtga atttgtattt
3421 attttgagtt atacttgaca cagaattcct tttttaaaaa aatatgtgtg tattttggaa
3481 aaaaaattca tagatgttaa aatttctgca tggttaccag tttttctcac aacactgaat
3541 ttggtagctt ttcccgaaaa aatcttcaca gtaatttttt gtctgtatat atttgagggc
3601 ctttttttaa aaaaaaaaaa aagaaaagaa aaatataatt gtttgatttt tgagattaaa
3661 acaaacaaaa agagaggcat tttcaaaatt tcagaacttt caggagggca agagaatatc
3721 aaacaaagat ttctggaagt attttgccaa ccttctggtt gagctgcaag aaaatattta
3781 tggtgagaac ttttctgttt cccgttattg ggtttttggt tggtttttgt ttgtttttta
3841 ctatgctttg gtctgtaaaa atatgcaact gaactacatt cagaaggaaa tattgtctac
3901 atagaatatt atatgaagtt ggtacataat tctgatgagg aaaaaaaatc tttgcaattc
3961 tttaagccaa aaaaaaaaaa a
//