LOCUS BC037280 3528 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens coatomer protein complex, subunit beta 1, mRNA (cDNA clone MGC:33032 IMAGE:4831366), complete cds. ACCESSION BC037280 VERSION BC037280.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3528) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3528) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC037280.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: d Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222324. FEATURES Location/Qualifiers source 1..3528 /db_xref="H-InvDB:HIT000051882" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33032 IMAGE:4831366" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3528 /gene="COPB1" /gene_synonym="DKFZp761K102" /db_xref="GeneID:1315" /db_xref="HGNC:HGNC:2231" /db_xref="MIM:600959" CDS 302..3163 /gene="COPB1" /gene_synonym="DKFZp761K102" /codon_start=1 /product="coatomer protein complex, subunit beta 1" /protein_id="AAH37280.1" /db_xref="GeneID:1315" /db_xref="HGNC:HGNC:2231" /db_xref="MIM:600959" /translation="MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKK VIIMILNGEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVC DAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIY TIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQT FGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPT AIKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDL EVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSV RFPDMAANVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIK SVKIYRGALWILGEYCSTKEDIQSVMTEIRRSLGEIPIVESEIKKEAGELKPEEEITV GPVQKLVTEMGTYATQSALSSSRPTKKEEDRPPLRGFLLDGDFFVAASLATTLTKIAL RYVALVQEKKKQNSFVAEAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECS PLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEKRNVTVQPDDPISFMQLTAKNEM NCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLTGFSDPVYAEAYVHVNQYDIV LDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPHDFANIKANVKVASTENGI IFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEFRQMWAEFEWENKVTVN TNMVDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSIFGEDALANVSIEKP IHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSI" BASE COUNT 1114 a 675 c 744 g 995 t ORIGIN 1 agccaaggac tctggagccg ccgccgccgc tgctgcggtt catatccgga gtagacggag 61 ccgcagtaga cggatccgcg gctgcaccaa accactgccc ctcggagcct ggtagtgggc 121 cacaagcccc cagtcccaga ggcgtggtgg gtcgggcaga gtcggaagaa ctggctttct 181 agctggaaga tgcggaaggg gagcgactag gccgcttgcg tctgggcctg gcagaaggga 241 ccggattttc tggcatcctt aaatcttgtg tcaaggattg gttataatat aaccagaaac 301 catgacggcg gctgagaacg tatgctacac gttaattaac gtgccaatgg attcagaacc 361 accatctgaa attagcttaa aaaatgatct agaaaaagga gatgtaaagt caaagactga 421 agctttgaag aaagtaatca ttatgattct gaatggtgaa aaacttcctg gacttctgat 481 gaccatcatt cgttttgtgc tacctcttca ggatcacact atcaagaaat tacttctggt 541 attttgggaa attgttccta aaacaactcc agatgggaga cttttacatg agatgatcct 601 tgtatgtgat gcatacagaa aggatcttca acatcctaat gaatttattc gaggatctac 661 tcttcgtttt ctttgcaaat tgaaagaagc agaattgcta gaacctttaa tgccagctat 721 tcgtgcatgt ttggagcatc gacacagcta tgttagaaga aatgctgttt tggccatcta 781 taccatctat agaaattttg aacatcttat acctgatgct cctgaactga tacatgattt 841 tctggtgaat gagaaggatg caagttgcaa aaggaatgca tttatgatgc taattcatgc 901 agatcaggat cgagctttgg attacttaag tacttgcatt gatcaagttc aaacatttgg 961 agacattctg cagctggtta ttgttgaact gatttataag gtctgtcatg ctaatccatc 1021 agaaagagct cgttttattc gctgcatcta taacttatta cagtcatcca gccctgctgt 1081 aaaatatgaa gctgctggga cattagtgac actctctagt gcaccaactg caatcaaggc 1141 tgctgctcag tgttacattg atttaattat taaggagagc gacaacaatg taaaactcat 1201 agttttggat cgcttgatag aattaaaaga gcatcctgct catgaacgag tactacagga 1261 tctggttatg gatatcctaa gagtattgag cacaccagac ttagaagtac gaaagaaaac 1321 tctgcagtta gcactggatc ttgtctcttc tagaaatgtt gaagagctgg ttattgtcct 1381 gaagaaggaa gtgataaaaa caaataatgt gtctgagcat gaagatactg acaaatacag 1441 acaactccta gtgcgaacat tgcattcctg ttctgtccga tttccagata tggctgcaaa 1501 tgttattcct gtgttaatgg aatttctcag tgacaacaac gaagcagcag ctgctgatgt 1561 cttggagttt gttcgtgaag ccattcagcg ctttgataac ctgagaatgc ttattgttga 1621 gaagatgctt gaagtctttc atgctattaa atctgtcaag atttaccgag gagcattatg 1681 gatcctggga gaatactgta gtaccaagga agacattcag agtgtgatga ctgagatccg 1741 caggtccctt ggagagatcc caattgtaga gtcagaaata aagaaagaag ctggtgaatt 1801 aaaacctgaa gaagaaataa ctgtagggcc agttcagaaa ttggttactg aaatgggtac 1861 ctatgcaact cagagtgccc ttagcagttc tagacccacc aagaaagagg aagacagacc 1921 tcccttgaga ggattccttc tggatggaga tttctttgtt gctgcctccc ttgccacaac 1981 tctgaccaag attgcattgc gctatgtagc tttggttcag gagaagaaaa agcaaaattc 2041 ttttgttgct gaggctatgt tgctcatggc tactatcctg catttgggaa aatcctctct 2101 tcctaagaag ccaattactg atgatgatgt ggatcgaatt tccctgtgcc tcaaggtctt 2161 gtctgaatgt tcacctttaa tgaatgacat tttcaataag gaatgcagac agtccctttc 2221 tcacatgtta tctgctaaac tagaagaaga gaaattatcc caaaagaaag aatctgaaaa 2281 gaggaatgtg acagtacagc ctgatgaccc catttccttc atgcaactaa ctgctaagaa 2341 tgaaatgaac tgcaaggaag atcagtttca gctgagttta ctggcagcaa tgggtaacac 2401 acagaggaaa gaggcagcag atcccctagc atctaaactt aacaaggtca cccaattgac 2461 aggtttctca gatcctgtat atgcagaagc ttacgttcat gtcaaccaat atgatattgt 2521 cctggatgta cttgttgtga accaaaccag tgatactttg cagaattgca cattagaact 2581 agctacacta ggggatctga aacttgtgga aaagccgtct cctttgactc ttgctcctca 2641 tgacttcgca aatattaaag ctaacgtcaa agtagcatca acagaaaatg gaataatttt 2701 tggtaatata gtttatgatg tctctggagc agcaagtgac agaaattgtg tggttctcag 2761 tgatattcac atcgacatca tggactatat ccagcctgca acttgcactg atgcagaatt 2821 ccgtcagatg tgggccgaat ttgaatggga aaacaaagtg acagttaaca ccaacatggt 2881 tgatttaaat gactacttac agcacatatt aaagtcaacc aatatgaaat gcctgactcc 2941 agaaaaggcc ctttctggtt actgtggctt tatggcagcc aacctttatg ctcgttccat 3001 atttggtgaa gatgcacttg caaatgtcag cattgagaag ccaattcacc agggaccaga 3061 tgctgctgtt accggccata taagaattcg tgcaaagagc cagggaatgg ccttaagtct 3121 tggagataaa atcaacttgt cacagaagaa aactagtata taaaaataaa caaaaagtcc 3181 ttgaagcttt acagttaatt taggtatggg cttactggac tccaacatct tttgtactct 3241 ttcatgctta tatagaatct gagttcatgc tgaatacttt tcagccaata atttatagcc 3301 tttcccttaa atcaagattg agtttaaaat tatagtttgt cttttgtctt aacagttctg 3361 aatgctgtcc tcaaagtata taatgtttca tgtaccaaga cccttttcac agtacaataa 3421 acagatctat tcataaattt ttgttatttt ataaataaat gattacataa ttttagttat 3481 aaaaaaaaaa aaaaaaaaaa agaaaaaaaa aaaaaaaaaa aaaaaaaa //