LOCUS BC037169 3743 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2, mRNA (cDNA clone MGC:45324 IMAGE:4994235), complete cds. ACCESSION BC037169 VERSION BC037169.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3743) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3743) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: g Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62739164. FEATURES Location/Qualifiers source 1..3743 /db_xref="H-InvDB:HIT000051859" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45324 IMAGE:4994235" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3743 /gene="PLOD2" /gene_synonym="LH2" /gene_synonym="TLH" /db_xref="GeneID:5352" /db_xref="HGNC:HGNC:9082" /db_xref="MIM:601865" CDS 178..2454 /gene="PLOD2" /gene_synonym="LH2" /gene_synonym="TLH" /codon_start=1 /product="procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2" /protein_id="AAH37169.1" /db_xref="GeneID:5352" /db_xref="HGNC:HGNC:9082" /db_xref="MIM:601865" /translation="MGGCTVKPQLLLLALVLHPWNPCLGADSEKPSSIPTDKLLVITV ATKESDGFHRFMQSAKYFNYTVKVLGQGEEWRGGDGINSIGGGQKVRLMKEVMEHYAD QDDLVVMFTECFDVIFAGGPEEVLKKFQKANHKVVFAADGILWPDKRLADKYPVVHIG KRYLNSGGFIGYAPYVNRIVQQWNLQDNDDDQLFYTKVYIDPLKREAINITLDHKCKI FQTLNGAVDEVVLKFENGKARAKNTFYETLPVAINGNGPTKILLNYFGNYVPNSWTQD NGCTLCEFDTVDLSAVDVHPNVSIGVFIEQPTPFLPRFLDILLTLDYPKEALKLFIHN KEVYHEKDIKVFFDKAKHEIKTIKIVGPEENLSQAEARNMGMDFCRQDEKCDYYFSVD ADVVLTNPRTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYVDIVQG NRVGVWNVPYMANVYLIKGKTLRSEMNERNYFVRDKLDPDMALCRNAREMTLQREKDS PTPETFQMLSPPKGVFMYISNRHEFGRLLSTANYNTSHYNNDLWQIFENPVDWKEKYI NRDYSKIFTENIVEQPCPDVFWFPIFSEKACDELVEEMEHYGKWSGGKHHDSRISGGY ENVPTDDIHMKQVDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLNFVVKYSPERQR SLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIESPRKGWSFMHPGRLTHLHE GLPVKNGTRYIAVSFIDP" BASE COUNT 1198 a 651 c 754 g 1140 t ORIGIN 1 ccacgcgtcc gctcagctgc gttacgcgcc gctccggctg ccggccgcgc gccttgcccg 61 ccggctcccg cccgcaatcg gcggctcagg gcggacccgg gtctctgcgt tctcgcgaga 121 agcgcggcgc tgcggggccg tgggcgcctg agcccgcgcg gccctcgagg gccgaatatg 181 gggggatgca cggtgaagcc tcagctgctg ctcctggcgc tcgtcctcca cccctggaat 241 ccctgtctgg gtgcggactc ggagaagccc tcgagcatcc ccacagataa attattagtc 301 ataactgtag caacaaaaga aagtgatgga ttccatcgat ttatgcagtc agccaaatat 361 ttcaattata ctgtgaaggt ccttggtcaa ggagaagaat ggagaggtgg tgatggaatt 421 aatagtattg gagggggcca gaaagtgaga ttaatgaaag aagtcatgga acactatgct 481 gatcaagatg atctggttgt catgtttact gaatgctttg atgtcatatt tgctggtggt 541 ccagaagaag ttctaaaaaa attccaaaag gcaaaccaca aagtggtctt tgcagcagat 601 ggaattttgt ggccagataa aagactagca gacaagtatc ctgttgtgca cattgggaaa 661 cgctatctga attcaggagg atttattggc tatgctccat atgtcaaccg tatagttcaa 721 caatggaatc tccaggataa tgatgatgat cagctctttt acactaaagt ttacattgat 781 ccactgaaaa gggaagctat taacatcaca ttggatcaca aatgcaaaat tttccagacc 841 ttaaatggag ctgtagatga agttgtttta aaatttgaaa atggcaaagc cagagctaag 901 aatacatttt atgaaacatt accagtggca attaatggaa atggacccac caagattctc 961 ctgaattatt ttggaaacta tgtacccaat tcatggacac aggataatgg ctgcactctt 1021 tgtgaattcg atacagtcga cttgtctgca gtagatgtcc atccaaacgt atcaataggt 1081 gtttttattg agcaaccaac cccttttcta cctcggtttc tggacatatt gttgacactg 1141 gattacccaa aagaagcact taaacttttt attcataaca aagaagttta tcatgaaaag 1201 gacatcaagg tattttttga taaagctaag catgaaatca aaactataaa aatagtagga 1261 ccagaagaaa atctaagtca agcggaagcc agaaacatgg gaatggactt ttgccgtcag 1321 gatgaaaagt gtgattatta ctttagtgtg gatgcagatg ttgttttgac aaatccaagg 1381 actttaaaaa ttttgattga acaaaacaga aagatcattg ctcctcttgt aactcgtcat 1441 ggaaagctgt ggtccaattt ctggggagca ttgagtcctg atggatacta tgcacgatct 1501 gaagattatg tggatattgt tcaagggaat agagtaggag tatggaatgt cccatatatg 1561 gctaatgtgt acttaattaa aggaaagaca ctccgatcag agatgaatga aaggaactat 1621 tttgttcgtg ataaactgga tcctgatatg gctctttgcc gaaatgctag agaaatgact 1681 ttacaaaggg aaaaagactc ccctactccg gaaacattcc aaatgctcag ccccccaaag 1741 ggtgtattta tgtacatttc taatagacat gaatttggaa ggctattatc cactgctaat 1801 tacaatactt cccattataa caatgacctc tggcagattt ttgaaaatcc tgtggactgg 1861 aaggaaaagt atataaaccg tgattattca aagattttca ctgaaaatat agttgaacag 1921 ccctgtccag atgtcttttg gttccccata ttttctgaaa aagcctgtga tgaattggta 1981 gaagaaatgg aacattacgg caaatggtct gggggaaaac atcatgatag ccgtatatct 2041 ggtggttatg aaaatgtccc aactgatgat atccacatga agcaagttga tctggagaat 2101 gtatggcttc attttatccg ggagttcatt gcaccagtta cactgaaggt ctttgcaggc 2161 tattatacga agggatttgc actactgaat tttgtagtaa aatactcccc tgaacgacag 2221 cgttctcttc gtcctcatca tgatgcttct acatttacca taaacattgc acttaataac 2281 gtgggagaag actttcaggg aggtggttgc aaatttctaa ggtacaattg ctctattgag 2341 tcaccacgaa aaggctggag cttcatgcat cctgggagac tcacacattt gcatgaagga 2401 cttcctgtta aaaatggaac aagatacatt gcagtgtcat ttatagatcc ctaagttatt 2461 tacttttcat tgaattgaaa tttattttgg gtgaatgact ggcatgaaca cgtctttgaa 2521 gttgtggctg agaagatgag aggaatattt aaataacatc aacagaacaa cttcactttg 2581 ggccaaacat ttgaaaaact ttttataaaa aattgtttga tatttcttaa tgtctgctct 2641 gagccttaaa acacagattg aagaagaaaa gaaagaaaaa acttaaatat ttatttctat 2701 gctttgttgc ctctgagaat aatgacaatt tatgaatttg tgtttcaaat tgataaaata 2761 tttaggtaca aataacaaga ctaataatat tttcttattt aaaaaaagca tgggaagatt 2821 tttatttatc aaaatataga ggaaatgtag acaaaatgga tataaatgaa aattaccatg 2881 ttgtaaaacc ttgaaaatca gattctaact ggatttgtat gcaactaagt atttttctga 2941 acacctatgc aggtcttatt tacagtagtt actaagggaa cacacaaaga attacacaac 3001 gttttcctca agaaaatggt acaaaacaca accgaggagc gtatacagtt gaaaacattt 3061 ttgttttgat tggaaggcag attattttat attagtatta aaaatcaaac cctatgtttc 3121 tttcagatga atcttccaaa gtggattata ttaagcaggt attagattta ggaaaacctt 3181 tccatttctt aaagtattat caagtgtcaa gatcagcaag tgtccttaag tcaaacaggt 3241 tttttttgtt gttgtttttg ctttgtttcc ttttttagaa agttctagaa aataggaaaa 3301 cgaaaaattt cattgagatg agtagtgcat ttaattattt tttaaaaaac tttttaagta 3361 cttgaatttt atatcaggaa aacaaagttg ttgagccttg cttcttccgt tttgcccttt 3421 gtctcgctcc ttattctttt tttgggggga gggttatttg cttttttatc ttcctggcat 3481 aatttccatt ttattcttct gagtgtctat gttaacttcc ctctatcccg cttataaaaa 3541 aattctccaa caaaaatact tgttgacttg atgttttatc acttctctaa gtaaggttga 3601 aatatcctta ttgtagctac tgtttttaat gtaaaggtta aacttgaaaa gaaattctta 3661 atcacggtgc caaaattcat tttctaacac catgtgttag aaaattataa aaaataaaat 3721 aattttagaa aaaaaaaaaa aaa //