LOCUS BC036796 1500 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens SVOP-like, mRNA (cDNA clone MGC:46715 IMAGE:5590416),
complete cds.
ACCESSION BC036796
VERSION BC036796.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: f Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33457321.
FEATURES Location/Qualifiers
source 1..1500
/db_xref="H-InvDB:HIT000051815"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46715 IMAGE:5590416"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1500
/gene="SVOPL"
/db_xref="GeneID:136306"
/db_xref="HGNC:HGNC:27034"
CDS 74..1096
/gene="SVOPL"
/codon_start=1
/product="SVOP-like"
/protein_id="AAH36796.1"
/db_xref="GeneID:136306"
/db_xref="HGNC:HGNC:27034"
/translation="MAAGRLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVII
PTIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAALATLERVAKMNRSVMP
EGKLVEPVLEKRGRFADLLDAKYLRTTLQIWVIWLGISFAYYGVILASAELLERDLVC
GSKSDSAVVVTGGDSGESQSPCYCHMFAPSDYRTMIISTIGEIALNPLNILGINFLGR
RLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTVYIYTAEVYPTTMR
ALGMGTSGSLCRIGAMVAPFISQVLMSASILGALCLFSSVCVVCAISAFTLPIETKGR
ALQQIK"
BASE COUNT 400 a 332 c 347 g 421 t
ORIGIN
1 caggacgtct tccagatggt gttttttggc tacatgattt tcagtatcct ctttggcctc
61 ctggctgaca gatatggccg ctggaaggtt aatcataaag actgaatttt tgcccacgaa
121 ataccgaggc tatatgttac ccttgtctca ggtgttctgg cttgcgggct ccctgctcat
181 cattggcttg gcctctgtga tcatccccac catcgggtgg cgctggctca ttcgcgtcgc
241 ctccatcccg ggcatcatcc tcatcgtggc cttcaagttt attcctgaat ctgcccggtt
301 caatgtctcc actgggaaca ctcgggctgc cctggccact ctggagcgcg ttgccaagat
361 gaaccgctcg gtcatgccgg aggggaagct ggtggagccc gtcctggaaa aaagaggaag
421 atttgcagac ctattggatg ctaaatattt acggaccaca ttacagatct gggtcatatg
481 gcttggaatc tcttttgcct actatggggt tatcctggcc agtgctgagc tgctggagcg
541 ggacttggtc tgtggttcaa agtcagactc tgcggtggtg gtgactgggg gggactcagg
601 ggagagccag agcccctgct actgccacat gtttgcaccc tctgactatc ggaccatgat
661 catcagcacc atcggtgaaa ttgctttgaa tcctttaaat atactgggca tcaatttcct
721 gggaagacgg ctgagccttt ctattaccat gggatgcacg gctttattct tccttctcct
781 caacatttgc acttcaagtg ccggcctgat tggcttcctc ttcatgctga gggctctggt
841 agctgcaaac ttcaacaccg tctacattta cacagctgag gtctacccca ccacgatgcg
901 cgctttgggg atgggaacca gcggctccct gtgtcgcatt ggtgcaatgg tggcgccatt
961 tatatcccag gttcttatga gtgcatcaat actgggggcc ctgtgtctct tctcatctgt
1021 ctgtgttgta tgcgccattt ctgcattcac tctccccatc gaaaccaaag gacgggccct
1081 ccagcaaatt aaatgaagac ctgcaaagct atgtctacca gatgagaaaa atgaattcta
1141 tcttcagaac tgcggtgcat ttttttaaaa cttggtttta cttctgtatg ctactcggta
1201 attagtaaag tgattttttt tttaaaggca tatatgggaa tggggtaggt aactgtatat
1261 tgatctcttc cttgaggaac aatatataaa gtacttttat aaaatataat ttaagctttc
1321 aaaggggtgt gagagggaga tggtgggggg gaagatggct tttcttcatt gaaatcaagt
1381 ctgtaaacct ttatatgaat aaatactaaa ttttaaactt aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//