LOCUS BC035582 2910 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens tripartite motif-containing 22, mRNA (cDNA clone MGC:44863 IMAGE:5583800), complete cds. ACCESSION BC035582 VERSION BC035582.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2910) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2910) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: p Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 15208661. FEATURES Location/Qualifiers source 1..2910 /db_xref="H-InvDB:HIT000051424" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:44863 IMAGE:5583800" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2910 /gene="TRIM22" /gene_synonym="GPSTAF50" /gene_synonym="RNF94" /gene_synonym="STAF50" /db_xref="GeneID:10346" /db_xref="HGNC:HGNC:16379" /db_xref="MIM:606559" CDS 153..1649 /gene="TRIM22" /gene_synonym="GPSTAF50" /gene_synonym="RNF94" /gene_synonym="STAF50" /codon_start=1 /product="tripartite motif-containing 22" /protein_id="AAH35582.1" /db_xref="GeneID:10346" /db_xref="HGNC:HGNC:16379" /db_xref="MIM:606559" /translation="MDFSVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIK ESVIISRGESSCPVCQTRFQPGNLRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGK KLQIFCKEDGKVICWVCELSQEHQGHQTFRINEVVKECQEKLQVALQRLIKEDQEAEK LEDDIRQERTAWKNYIQIERQKILKGFNEMRVILDNEEQRELQKLEEGEVNVLDNLAA ATDQLVQQRQDASTLISDLQRRLRGSSVEMLQDVIDVMKRSESWTLKKPKSVSKKLKS VFRVPDLSGMLQVLKELTDVQYYWVDVMLNPGSATSNVAISVDQRQVKTVRTCTFKNS NPCDFSAFGVFGCQYFSSGKYYWEVDVSGKIAWILGVHSKISSLNKRKSSGFAFDPSV NYSKVYSRYRPQYGYWVIGLQNTCEYNAFEDSSSSDPKVLTLFMAVPPCRIGVFLDYE AGIVSFFNVTNHGALIYKFSGCRFSRPAYPYFNPWNCLVPMTVCPPSS" BASE COUNT 855 a 594 c 608 g 853 t ORIGIN 1 ccacgcgtcc gatctggttt acaccggctc ctgccctgcc ttcactcttc tcccctgatt 61 caagactcct ctgctttgga ctgaagcact gcaggagttt gtgaccaaga acttcaagag 121 tcaagacaga aggaagccaa gggagcagtg caatggattt ctcagtaaag gtagacatag 181 agaaggaggt gacctgcccc atctgcctgg agctcctgac agaacctctg agcctagatt 241 gtggccacag cttctgccaa gcctgcatca ctgcaaagat caaggagtca gtgatcatct 301 caagagggga aagcagctgt cctgtgtgtc agaccagatt ccagcctggg aacctccgac 361 ctaatcggca tctggccaac atagttgaga gagtcaaaga ggtcaagatg agcccacagg 421 aggggcagaa gagagatgtc tgtgagcacc atggaaaaaa actccagatc ttctgtaagg 481 aggatggaaa agtcatttgc tgggtttgtg aactgtctca ggaacaccaa ggtcaccaaa 541 cattccgcat aaacgaggtg gtcaaggaat gtcaggaaaa gctgcaggta gccctgcaga 601 ggctgataaa ggaggatcaa gaggctgaga agctggaaga tgacatcaga caagagagaa 661 ccgcctggaa gaattatatc cagatcgaga gacagaagat tctgaaaggg ttcaatgaaa 721 tgagagtcat cttggacaat gaggagcaga gagagctgca aaagctggag gaaggtgagg 781 tgaatgtgct ggacaacctg gcagcagcta cagaccagct ggtccagcag aggcaggatg 841 ccagcacgct catctcagat ctccagcgga ggttgagggg atcgtcagta gagatgctgc 901 aggatgtgat tgacgtcatg aaaaggagtg aaagctggac attgaagaag ccaaaatctg 961 tttccaagaa actaaagagt gtattccgag taccagatct gagtgggatg ctgcaagttc 1021 ttaaagagct gacagatgtc cagtactact gggtggacgt gatgctgaat ccaggcagtg 1081 ccacttcgaa tgttgctatt tctgtggatc agagacaagt gaaaactgta cgcacctgca 1141 catttaagaa ttcaaatcca tgtgattttt ctgcttttgg tgtcttcggc tgccaatatt 1201 tctcttcggg gaaatattac tgggaagtag atgtgtctgg aaagattgcc tggatcctgg 1261 gcgtacacag taaaataagt agtctgaata aaaggaagag ctctgggttt gcttttgatc 1321 caagtgtaaa ttattcaaaa gtttactcca gatatagacc tcaatatggc tactgggtta 1381 taggattaca gaatacatgt gaatataatg cttttgagga ctcctcctct tctgatccca 1441 aggttttgac tctctttatg gctgtgcctc cctgtcgtat tggggttttc ctagactatg 1501 aggcaggcat tgtctcattt ttcaatgtca caaaccacgg agcactcatc tacaagttct 1561 ctggatgtcg cttttctcga cctgcttatc cgtatttcaa tccttggaac tgcctagtcc 1621 ccatgactgt gtgcccaccg agctcctgag tgttctcatt cctttaccca cttctgcata 1681 gtagcccttg tgctgagact cagattctgc acctgagttc atctctactg agaccatctc 1741 ttcctttctt tccccttctt ttacttagaa tgtctttgta ttcatttgct agggcttcca 1801 tagcaaagca tcatagattg ctgatttaaa ctgtaattgt attgccgtac tgtgggctgg 1861 aaatcccaaa tctagattcc agcagagttg gttctttctg aggtctgcaa ggaagggctc 1921 tgttccatgc ctctctcctt ggcttgtaga aggcatcttg tccctatgac tcttcacatt 1981 gtctttatgt acatctctgt gcccaagttt tcccttttta ttaagacacc agtcatactg 2041 gctcagggcc caccgctaat gccttaatga aatcatttta acattatatt ctctacaaag 2101 accttatttc caaataagat aatatttgga ggtattggga ataaaaactc caacatataa 2161 atttgaggaa ggcacgattt cactcataac aatcttaccc tttcttgcaa gagatgcttg 2221 tacattattt tcctaatacc ttggtttcac tagtagtaaa cattattttt tttttatatt 2281 tgcaaaggaa acatatctaa tccttcctat agaaagaaca gtattgctgt aattcctttt 2341 cttttcttcc tcatttcctc tgccccttaa aagattgaag aaagagaaac ttgtcaactc 2401 atatccacgt tatctagcaa agtacataag aatctatcac taagtaatgt atccttcaga 2461 atgtgttggt ttaccagtga caccccatat tcatcacaaa attaaagcaa gaagtccata 2521 gtaatttatt tgctaatagt ggatttttaa tgctcagagt ttctgaggtc aaattttatc 2581 ttttcactta caagctctat gatcttaaat aatttactta atgtattttg gtgtattttc 2641 ctcaaattaa tattggtgtt caagactata tctaattcct ctgatcactt tgagaaacaa 2701 acttttatta aatgtaaggc acttttctat gaattttaaa tataaaaata aatattgttc 2761 tgattattac tgaaaagatg tcagccattt caatgtcttg ggaaacaatt ttttgttttt 2821 gttctgtttt ctttttgctt caataaaaca atagctggct ctaaaaaaaa aaaaaaaaaa 2881 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //