LOCUS BC034018 4115 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens neuroligin 4, X-linked, mRNA (cDNA clone MGC:22376
IMAGE:4702963), complete cds.
ACCESSION BC034018
VERSION BC034018.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4115)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4115)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: b Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31317255.
FEATURES Location/Qualifiers
source 1..4115
/db_xref="H-InvDB:HIT000042042"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22376 IMAGE:4702963"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..4115
/gene="NLGN4X"
/gene_synonym="ASPGX2"
/gene_synonym="AUTSX2"
/gene_synonym="HLNX"
/gene_synonym="HNLX"
/gene_synonym="KIAA1260"
/gene_synonym="MGC22376"
/gene_synonym="NLGN"
/db_xref="GeneID:57502"
/db_xref="HGNC:HGNC:14287"
/db_xref="MIM:300427"
CDS 431..2881
/gene="NLGN4X"
/gene_synonym="ASPGX2"
/gene_synonym="AUTSX2"
/gene_synonym="HLNX"
/gene_synonym="HNLX"
/gene_synonym="KIAA1260"
/gene_synonym="MGC22376"
/gene_synonym="NLGN"
/codon_start=1
/product="neuroligin 4, X-linked"
/protein_id="AAH34018.1"
/db_xref="GeneID:57502"
/db_xref="HGNC:HGNC:14287"
/db_xref="MIM:300427"
/translation="MSRPQGLLWLPLLFTPVCVMLNSNVLLWLTALAIKFTLIDSQAQ
YPVVNTNYGKIRGLRTPLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRN
TTQFAAVCPQHLDERSLLHDMLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDDIH
DQNSKKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAA
KGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKA
IIQSGTALSSWAVNYQPAKYTRILADKVGCNMLDTTDMVECLRNKNYKELIQQTITPA
TYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVDGIVDNEDGVTP
NDFDFSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADKENPETRRKTLVALFTDHQWV
APAVATADLHAQYGSPTYFYAFYHHCQSEMKPSWADSAHGDEVPYVFGIPMIGPTELF
SCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWSKYNPKD
QLYLHIGLKPRVRDHYRATKVAFWLELVPHLHNLNEIFQYVSTTTKVPPPDMTSFPYG
TRRSPAKIWPTTKRPAITPANNPKHSKDPHKTGPEDTTVLIETKRDYSTELSVTIAVG
ASLLFLNILAFAALYYKKDKRRHETHRRPSPQRNTTNDIAHIQNEEIMSLQMKQLEHD
HECESLQAHDTLRLTCPPDYTLTLRRSPDDIPLMTPNTITMIPNTLTGMQPLHTFNTF
SGGQNSTNLPHGHSTTRV"
BASE COUNT 1139 a 1082 c 926 g 968 t
ORIGIN
1 agaaggggaa ggctcctggg ctttcaatac atcctcctga atcatacctc gtttcgggtt
61 ccctagaaaa atctggacgt gtaaaaagaa ctcttaacgg ccgatgcagc tcttccaaag
121 ctaaggctgc cttggagttt tcataagaaa ttgtccctgg aggtgttgga tgatcacagc
181 ttccttggag cattgcagtt gctggaatcc agtttcagga ttaagggagg gctgcctcct
241 tgcaatgggc tgccaagaaa acggctgtgc ttgttcttaa cctcaggctc tgtctgtgat
301 cagtctgaga gtctctccca ggtctactgc tccctggaaa gccctatctc tctgcaggct
361 cgcctctggg ctttgtctcc ttggagccac atcactggga cagctgtgga tgtggatgca
421 gatttgaacc atgtcacggc cccagggact gctatggctt cctttgttgt tcaccccggt
481 ctgcgtcatg ttaaactcca atgtcctcct gtggttaact gctcttgcca tcaagttcac
541 cctcattgac agccaagcac agtatccagt tgtcaacaca aattatggca aaatccgggg
601 cctaagaaca ccgttaccca atgagatctt gggtccagtg gagcagtact taggggtccc
661 ctatgcctca ccccccactg gagagaggcg gtttcagccc ccagaacccc cgtcctcctg
721 gactggcatc cgaaatacta ctcagtttgc tgctgtgtgc ccccagcacc tggatgagag
781 atccttactg catgacatgc tgcccatctg gtttaccgcc aatttggata ctttgatgac
841 ctatgttcaa gatcaaaatg aagactgcct ttacttaaac atctacgtgc ccacggaaga
901 tgatattcat gatcagaaca gtaagaagcc cgtcatggtc tatatccatg ggggatctta
961 catggagggc accggcaaca tgattgacgg cagcattttg gcaagctacg gaaacgtcat
1021 tgtgatcacc attaactacc gtctgggaat actagggttt ttaagtaccg gtgaccaggc
1081 agcaaaaggc aactatgggc tcctggatca gattcaagca ctgcggtgga ttgaggagaa
1141 tgtgggagcc tttggcgggg accccaagag agtgaccatc tttggctcgg gggctggggc
1201 ctcctgtgtc agcctgttga ccctgtccca ctactcagaa ggtctcttcc agaaggccat
1261 cattcagagc ggcaccgccc tgtccagctg ggcagtgaac taccagccgg ccaagtacac
1321 tcggatattg gcagacaagg tcggctgcaa catgctggac accacggaca tggtagaatg
1381 cctgcggaac aagaactaca aggagctcat ccagcagacc atcaccccgg ccacctacca
1441 catagccttc gggccggtga tcgacggcga cgtcatccca gacgaccccc agatcctgat
1501 ggagcaaggc gagttcctca actacgacat catgctgggc gtcaaccaag gggaaggcct
1561 gaagttcgtg gacggcatcg tggataacga ggacggtgtg acgcccaacg actttgactt
1621 ctccgtgtcc aacttcgtgg acaaccttta cggctaccct gaagggaaag acactttgcg
1681 ggagactatc aagttcatgt acacagactg ggccgataag gaaaacccgg agacgcggcg
1741 gaaaaccctg gtggctctct ttactgacca ccagtgggtg gcccccgccg tggccaccgc
1801 cgacctgcac gcgcagtacg gctcccccac ctacttctat gccttctatc atcactgcca
1861 aagcgaaatg aagcccagct gggcagattc ggcccatggt gatgaggtcc cctatgtctt
1921 cggcatcccc atgatcggtc ccaccgagct cttcagttgt aacttttcca agaacgacgt
1981 catgctcagc gccgtggtca tgacctactg gacgaacttc gccaaaactg gtgatccaaa
2041 tcaaccagtt cctcaggata ccaagttcat tcacacaaaa cccaaccgct ttgaagaagt
2101 ggcctggtcc aagtataatc ccaaagacca gctctatctg catattggct tgaaacccag
2161 agtgagagat cactaccggg caacgaaagt ggctttctgg ttggaactcg ttcctcattt
2221 gcacaacttg aacgagatat tccagtatgt ttcaacaacc acaaaggttc ctccaccaga
2281 catgacatca tttccctatg gcacccggcg atctcccgcc aagatatggc caaccaccaa
2341 acgcccagca atcactcctg ccaacaatcc caaacactct aaggaccctc acaaaacagg
2401 gcctgaggac acaactgtcc tcattgaaac caaacgagat tattccaccg aattaagtgt
2461 caccattgcc gtcggggcgt cgctcctctt cctcaacatc ttagcttttg cggcgctgta
2521 ctacaaaaag gacaagaggc gccatgagac tcacaggcgc cccagtcccc agagaaacac
2581 cacaaatgat atcgctcaca tccagaacga agagatcatg tctctgcaga tgaagcagct
2641 ggaacacgat cacgagtgtg agtcgctgca ggcacacgac acactgaggc tcacctgccc
2701 gccagactac accctcacgc tgcgccggtc gccagatgac atcccactta tgacgccaaa
2761 caccatcacc atgattccaa acacactgac ggggatgcag cctttgcaca cttttaacac
2821 cttcagtgga ggacaaaaca gtacaaattt accccacgga cattccacca ctagagtata
2881 gctttgccct atttcccttc ctatccctct gccctacccg ctcagcaaca tagaagaggg
2941 aaggaaagag agaaggaaag agagagagaa agaaagtctc caaaccagga atgtttttgt
3001 cccactgact taagacaaaa atgcaaaaag gcagtcatcc catcccggca gacccttatc
3061 gttggtgttt tccagtatta caagatcaac ttctgaccct gtgaaatgtg agaagtacac
3121 atttctgtta aaataactgc tttaagatct ctaccactcc aatcgatgtt tagtgtgata
3181 ggacatcacc atttcaaggc cccgggtgtt tccaacgtca tggaagcagc tgacacttct
3241 gaaactcagc caaggacact tgatattttt taattacaat ggaagtttaa acatttcttt
3301 ctgtgccaca caatggatgg ctctccttaa gtgaagaaag agtcaatgag attttgccca
3361 gcacatggag ctgtaatcca gagagaagga aacgtagaaa tttattatta aaagaatgga
3421 ctgtgcagcg aaatctgtac ggttctgtgc aaagaggtgt tttgccagcc tgaactatat
3481 ttaagagact ttgtaaaaaa gaaaaatgta tatagctgtg agtttaaaca aaaaccacaa
3541 acagacaaac aagaaaaaaa gcttttattg gtgttttcac tttgaaagag cttttagcaa
3601 ggttgtgctt ttcattgtgc tctgtacgta tataaatata tatatatata cacacacaca
3661 cacacattag tcatatcacc tctgtttcct ccccaacaaa agaggctttt cttcttaatt
3721 acttgtggta aacaaagaca tgggattttc ttacatgaga ttctcatttg taggaggatg
3781 tgatgtccca cagaagaccc agacggtctg tgtggcctat ttcccccgtc aggttgcaca
3841 ggtgcatgca agagcattct taggagacca ctgttttgaa aaacttttga cttgtacgtg
3901 ttagccttca tgaaattgca gtacagagat gggtccccaa agtggagtgt atttacagct
3961 tgttaaatta gagacatgca cacacaaaga atcagtaggg agaaacaaaa atacaagtcc
4021 cgttctgtag ctctggccct ttgaatatgt ttaggaagag ttgcttccca tttcagggcc
4081 ctgccaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//