LOCUS BC033233 1332 bp mRNA linear HUM 30-MAR-2004 DEFINITION Homo sapiens SNAP25-interacting protein, mRNA (cDNA clone IMAGE:5423326), complete cds. ACCESSION BC033233 VERSION BC033233.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1332) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1332) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (25-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 43 Row: l Column: 24 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1332 /db_xref="H-InvDB:HIT000041848" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5423326" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1332 /gene="SNIP" /gene_synonym="KIAA1684" /db_xref="GeneID:80725" CDS 465..1238 /gene="SNIP" /gene_synonym="KIAA1684" /codon_start=1 /product="SNIP protein" /protein_id="AAH33233.1" /db_xref="GeneID:80725" /translation="MRVSEAARRQEDPLQRQRTLVEEERLRYLNDEELITQQLNDLEK SVEKIQRDVSHNHRLVPGPELEEKALVLKQLGETLTELKAHFPGLQSKMRVVLRVEVE AVKFLKEEPQRLDGLLKRCRGVTDTLAQIRRQVDEGVWPPPNNLLSQSPKKVTAETDF NKSVDFEMPPPSPPLNLHELSGPAEGASLTPKGGNPTKGLDTPGKRSVDKAVSVEVLG PGIVGGAMSQVHTFLRPSFLEWGVPILWVFFLGGGGPVP" BASE COUNT 276 a 434 c 383 g 239 t ORIGIN 1 cgcccgagtc cttcgccgct cactggcctc tctccgaacc ctttctcccc ttcccctttc 61 ttgagcttcc gctccctcgc tgaacctcca cttcctcacc aaggccttat ccctcgcccg 121 tgaccccctc attgagccct ccttctcctt ccctgagtcc ccatcgccct cctggagccc 181 cagtcaccca ctgagcccct ccgtcgtcag tatccctcgg ggcagttcca gttccttcct 241 gccctgcatc cctttccctg agtcagcgag agcccttccc ccaagtcctc tcagctcctc 301 cctcctgagc cccaacagtc tccccggccc tgcttggcag atggtcccac ctgtcaggag 361 cttggcatcg ccgagtccgc tcctcaagca ggcccagggg ccgtcagcta cagaaccagg 421 agtcggtgcg cgcgctgctg aagcgcacgg aggcagagct gagcatgcgc gtgtcggagg 481 cggcgcggcg gcaggaggac ccgctgcagc ggcagcgcac cctggtggaa gaggaacggc 541 tgcgctatct caacgacgag gagcttatta cccagcagct caatgacctg gagaaatcgg 601 tggagaagat ccagagagac gtgtcccaca accaccggct ggtgcccggc cctgagctgg 661 aggagaaggc actggtgctg aagcagctcg gggagacgct gacagagctc aaggctcact 721 tcccgggcct gcagagcaag atgcgggtgg tgctgcgcgt ggaggtggag gcggtgaagt 781 tcctgaagga ggagccccag cgcctggatg ggctcctcaa gcgctgccgc ggggtcacgg 841 acacgctggc ccagatccga aggcaagtgg atgagggtgt gtggccaccc cccaacaatc 901 tcctgagtca gtcccccaag aaggtgacgg cagagactga cttcaacaag agcgtggact 961 tcgaaatgcc accccccagc cccccgctga acctgcatga gctgagcggg ccagctgaag 1021 gagcctctct tacccccaag gggggcaacc ccaccaaagg cctggacact cctggcaaga 1081 gaagcgtgga caaagctgtg tctgttgagg tgctggggcc agggattgtg ggtggggcca 1141 tgagccaggt tcacacattc ttacgaccat ccttcctaga gtggggagtg ccaatcctgt 1201 gggtcttttt ccttggggga ggagggccag tgccctaatg gaagcctaag aagcataatg 1261 agggtgacat tagccctcct agacagaaag cgtattataa agctacaata atcaaaaaaa 1321 aaaaaaaaaa aa //