LOCUS BC033034 4803 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens DIX domain containing 1, mRNA (cDNA clone MGC:33331
IMAGE:4820652), complete cds.
ACCESSION BC033034
VERSION BC033034.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4803)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4803)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC033034.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39930478.
FEATURES Location/Qualifiers
source 1..4803
/db_xref="H-InvDB:HIT000051095"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33331 IMAGE:4820652"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4803
/gene="DIXDC1"
/gene_synonym="CCD1"
/gene_synonym="KIAA1735"
/db_xref="GeneID:85458"
/db_xref="HGNC:HGNC:23695"
CDS 423..1841
/gene="DIXDC1"
/gene_synonym="CCD1"
/gene_synonym="KIAA1735"
/codon_start=1
/product="DIX domain containing 1"
/protein_id="AAH33034.1"
/db_xref="GeneID:85458"
/db_xref="HGNC:HGNC:23695"
/translation="MGGTQVKCLTSPSPIHSAKSESIITQSEEKADFVIIPAEGIENR
TEGTDSPLSRDWRPGSPGTYLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGS
LPEDEQERPLALCEPGVNPEEQLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK
DALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQ
KDRLLQQHQAKLEEALRKLSDVSYHQVDLERELEHKDVLLAHCMKREADEATNYNSHN
SQSNGFLLPTAGKGATSVSNRGTSDLQLVRDALRSLRNSFSGHDPQHHTIDSLEQGIS
SLMERLHVMETQKKQERKVRVKSPRTQVGSEYRESWPPNSKLPHSQSSPTVSSTCTKV
LYFTDRSLTPFMVNIPKRLEEVTLKDFKAAIDREGNHRYHFKALDPEFGTVKEEIFHD
DDAIPGWEGKIVAWVEEDHGEN"
BASE COUNT 1325 a 1052 c 1139 g 1287 t
ORIGIN
1 ggggcgcagc ctgcgccgcc gggagcctcc ctcccagtgg gagatgggtt gagatgcccc
61 cgccaggggg gatgcccggc accgtgcgtc cgcggaggcc aagatgcagc ggccaggggc
121 cggcagcctg cgaggggagg cagcttccgc cggggccggg ctgctgcaca gtctgagcgg
181 ccgggactgc gcgcttcaga gcctggagca tcccagtcgc tggggccgag acgccgccgc
241 cgcagccgtt cccgctttct cccgcgagcc gggccagtag ctttgctagc tggccttccc
301 gtggaggcgt tttccagccc cagcgcgggg agacatgcct gaatttggga gcgatgtgac
361 tctcagcctc ccacttcacc cggggacgca ggcttgctga agcccaagac aggaggggga
421 ccatgggagg gacgcaagtc aaatgcctga cttcacccag tccaatccac agtgcaaaga
481 gcgagtccat tataacccag tcagaagaga aggcagattt tgtgattatt cccgctgaag
541 gaatagagaa cagaacagaa gggacagatt ctccattatc tcgagactgg cggccaggga
601 gccctggaac ctatctggag acctcatggg aagaacagct gttggaacaa caagaatatt
661 tagaaaaaga aatggaggaa gcaaagaaaa tgatatcagg actacaggcc ttactgctca
721 atggatcctt acctgaagat gaacaggaga ggcccttggc cctctgtgaa ccaggtgtca
781 atcccgagga acaactgatt ataatccaaa gtcgtctgga tcagagtatg gaggagaatc
841 aggacttaaa gaaggaactg ctgaaatgta aacaagaagc cagaaactta caggggataa
901 aggatgcctt gcagcagaga ttgactcagc aggacacatc tgttcttcag ctcaaacaag
961 agctactgag ggcaaatatg gacaaagatg agctgcacaa ccagaatgtg gatctgcaga
1021 ggaagctaga tgagaggaac cggctcttgg gagaatataa aaaagagctg gggcagaagg
1081 atcgccttct tcagcagcac caggccaagt tagaagaagc actccggaaa ctctctgatg
1141 tcagttacca ccaggtggat ctagagcgag agctagaaca caaagatgtc ctcttggctc
1201 actgtatgaa aagagaggca gatgaggcga ccaactacaa cagtcacaac tctcaaagca
1261 atggttttct ccttccaacg gcaggaaaag gagctacttc agtcagcaac agagggacca
1321 gcgacctgca gcttgttcga gatgctctcc gcagcctgcg caacagcttc agtggccacg
1381 atcctcagca ccacactatt gacagcttgg agcagggcat ttctagcctc atggagcgcc
1441 tgcatgttat ggagacgcag aagaaacaag aaagaaaggt tcgggtcaag tcacccagaa
1501 ctcaagtagg tagtgaatac cgggagtcct ggccccctaa ctcaaagttg cctcactcac
1561 agagctctcc aactgtcagc agcacctgta ctaaagtgct ctatttcact gaccggtcac
1621 ttacgccctt catggtcaat ataccaaaga ggttggagga ggtgacgtta aaggatttta
1681 aagcagctat tgatcgggaa ggaaatcacc ggtatcactt caaagcactg gatccagagt
1741 ttggcactgt caaagaggag attttccatg atgatgatgc catccctgga tgggaaggga
1801 aaattgtagc ttgggtggaa gaagaccatg gagagaatta atgccaagta tcagattgag
1861 ggcttatgga acctggtcac tccctggctg cttcactcag gaaagggaac taaaaccaga
1921 atacactaag aagtttatag tttgtgtgcc aaaacagaag cttctccaag catgatggcc
1981 acaggtcagt cctctttctg tgcctggcat atctggtact taaaattctg tccaaatgta
2041 gaccatgggt tcatctggag ttccttgtcc gtgggaacac agtgttctat tctactctga
2101 ggacaacaaa ccgaaggcct taaacgatgg ggatggatga tcccgcctct gtaggggcat
2161 ggctgctatt atctggaaat taggaattgg atgcatcatt cctgtgtgtt acagtattat
2221 tttaattggc ctcaatggtt gcagcaatca gagtcccagc gtttgtactc acagacaagg
2281 caaaggtacc agcttttctg tttctttgaa cctactgcaa accaagaata actcatgagg
2341 tggtaccaaa gatgaaagcc cagacttcag taatcttttg aaccagacgt ggatggtgct
2401 gaattgttgc ttggatggaa aaagggctgc ccatgttgtg ctacactatg ctaaaactgt
2461 aatttagtaa gaccttgggc tgcctcttct gtcttaactg gttctgcagc ttgtcctttt
2521 gcccacatag ggcctatttc atgtactgtt agttttctct ggggactctt taactttaga
2581 gccatttctt tttcttcaaa ctgatgaact tttgtttgaa aggcataagg agtgaaaagc
2641 tccttgaaaa tccaggcggg tatggaaagg tgctgctacc catatctttt tgactttctt
2701 tgtttcatga ctttaactca tggcatctcc tttgtagtaa aaggagacag accattaatt
2761 tcagcatttc tttgtgattt ataagtactg agcatgaagt acttgtctgc ccctcatttc
2821 aaggccagag ttattttcta tttatgtatt agtctaggct gatcttttag ggcacaatag
2881 aaacgatggg gcgtggagca tgagttgtga atggcaggga tcattctggg taaaaaaaac
2941 ctagaatcat ttctgatgtg caacattgtc aagtgaagaa gctaacagtt caactaccga
3001 gattatttga taacctgggt tttctcactc atccatcaag caccatcaac cagtcagcca
3061 ttattattta tatatgtatt accaaaagca gtctatctgc ctgtgacctc caatgtacac
3121 tgccaaacac aagagtagga cacatctgtt ctgggttctt gacctatctg tctccaattc
3181 atctcccctt ttcagccatt tcaacaaact actctttgga gctctgagat gacatcttgt
3241 tgttttatat agatgtatct tttaaaaata gttcacgttt ggagaattct tttgtactca
3301 tttgcttttt gtctgagaac catgtctatt tttataactg gagtgtgagt tctgtatctt
3361 ctcacattct gtatactgta tccattttct agagaaccca gtagctttta tacagtctct
3421 tcttaccacc ccttgtggtt tcagaacaag ctttatttta ttacgagtat attaatgaca
3481 actaattcct gttccaattc tacctgtttt agttgtgaag gtagttttgt gtaatccagt
3541 tgattgctcc tctggcagag agaaggagct caaaagatac ttgatgtctt tcatgtaagt
3601 ttacctggtc ttttcctatt gaagaatttt tcatcagaaa cgactgggaa agtttgggaa
3661 agtcagcaaa agaaagaatg catttcgaaa gcaaacagaa gaaaaaagta tattctcaca
3721 gtttttcccc aggaagtctg gagaaaaagt cctcatgtca ccaatttctc tgttgcatga
3781 attttagtgt tttgctataa gacagcatga gggctatcag gccaaaattc attattgtat
3841 ttccaataca gtttgtcttg aatgtctgtc tcttaaacca gtttttactt gtcagttttc
3901 tctcagcaaa cagtcttact attatgtgga atttaacttt tcagagaaaa tttccaaagt
3961 cctctacctt atttggcttt tatctgtgtc ttttggaaaa ggagctgcat ggcctcagtg
4021 cctccataaa aagcttaagt tgagttcatg ggagaacatt aagatcgttt tttttccctt
4081 ttagctcggt aatctcatgt accacaggta atgaccaagc atctctgcta gaggatgtac
4141 ctctcataac tcctgtgtaa aatgaggatc ctgttggtga tcctcattcc agtttccaaa
4201 gcgagaggag ccttctgagc agaagtatgc aagactgatt ctgtttggaa cagtttccta
4261 tttggctgca ttctaggagg cctcctgact tattcatagt attgtcgcct ggtggcattg
4321 gtgtggcgta gcttgtcctg ctacttgcta aagttctctt tctttgagaa aactgaggaa
4381 ccagaatgct tagagttcat aaaataatct ctaaaccatg ttaggttaaa acaaaatgac
4441 catctcacaa aaacgagttt agttgaatgc tcaatttctt acaaaatctt catttaaggc
4501 tgagtgtggt ggctcatgcc tgtaattcca gcactttggg aggccgaggc aggaagactg
4561 cttgagccca ggagttcaag accagcctgg gcaacatagg aagactctgt ctctacatag
4621 aaattttatt ataaaagtag ctggggatgg tggcacacac acctgtagtc ccagctactc
4681 aggaggttga ggtgggaaga ttgcttgagc ccaggagttt gaggttgcag tgagctgatc
4741 atgccactgc actctagcct aggctacaga gcaggacccc atctccaaaa aaaaaaaaaa
4801 aaa
//