LOCUS BC032777 2458 bp mRNA linear HUM 06-MAR-2007 DEFINITION Homo sapiens actin filament associated protein 1, mRNA (cDNA clone MGC:44840 IMAGE:4914388), complete cds. ACCESSION BC032777 VERSION BC032777.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2458) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2458) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 68 Row: g Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40807503. FEATURES Location/Qualifiers source 1..2458 /db_xref="H-InvDB:HIT000041714" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:44840 IMAGE:4914388" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2458 /gene="AFAP1" /gene_synonym="AFAP" /gene_synonym="AFAP-110" /db_xref="GeneID:60312" /db_xref="HGNC:HGNC:24017" /db_xref="MIM:608252" CDS 25..2217 /gene="AFAP1" /gene_synonym="AFAP" /gene_synonym="AFAP-110" /codon_start=1 /product="actin filament associated protein 1" /protein_id="AAH32777.1" /db_xref="GeneID:60312" /db_xref="HGNC:HGNC:24017" /db_xref="MIM:608252" /translation="MEELIVELRLFLELLDHEYLTSTVREKKAVITNILLRIQSSKGF DVKDHAQKQETANSLPAPPQMPLPEIPQPWLPPDSGPPPLPTSSLPEGYYEEAVPLSP GKAPEYITSNYDSDAMSSSYESYDEEEEDGKGKKTRHQWPSEEASMDLVKDAKICAFL LRKKRFGQWTKLLCVIKDTKLLCYKSSKDQQPQMELPLQGCNITYIPKDSKKKKHELK ITQQGTDPLVLAVQSKEQAEQWLKVIKEAYSGCSGPVDSECPPPPSSPVHKAELEKKL SSERPSSDGEGVVENGITTCNGKEQVKRKKSSKSEAKGTVSKVTGKKITKIISLGKKK PSTDEQTSSAEEDVPTCGYLNVLSNSRWRERWCRVKDNKLIFHKDRTDLKTHIVSIPL RGCEVIPGLDCKHPLTFRLLRNGQEVAVLEASSSEDMGRWIGILLAETGSSTDPEALH YDYIDVEMSASVIQTAKQTFCFMNRRVISANPYLGGTSNGYAHPSGTALHYDDVPCIN GSLKGKKPPVASNGVTGKGKTLSSQPKKADPAAVVKRTGSNAAQYKYGKNRVEADAKR LQTKEEELLKRKEALRNRLAQLRKERKDLRAAIEVNAGRKPQAILEEKLKQLEEECRQ KEAERVSLELELTEVKESLKKALAGGVTLGLAIEPKSGTSSPQSPVFRHRTLENSPIS SCDTSDTEGPVPVNSAAVLKKSQAAPGSSPCRGHVLRKAKEWELKNGT" BASE COUNT 661 a 650 c 703 g 444 t ORIGIN 1 ccacgcgtcc gggcggcctg agcaatggaa gagttaatag ttgaacttcg tctctttctt 61 gaactcctgg accatgaata tctaacctca actgtcaggg agaaaaaggc agtgataacc 121 aacattctgc taagaataca gtcatccaaa ggttttgatg tgaaggacca tgctcagaag 181 caggagaccg ctaacagcct gccagcccct cctcagatgc ccctgccgga gatccctcag 241 ccctggctgc ctcctgacag tgggcctcca ccattgccaa catcctccct cccagaaggt 301 tattatgagg aagctgtgcc actgagcccc ggaaaagctc cggaatacat cacatcaaat 361 tatgattccg atgcgatgag cagctcttat gagtcgtatg atgaagagga ggaggatggg 421 aaggggaaga aaacccggca ccagtggccc tccgaggagg cctccatgga cctggtcaag 481 gacgccaaaa tctgcgcctt cctgctgcgg aagaagcggt tcggccagtg gaccaagttg 541 ctctgcgtca tcaaagacac caaactgctg tgctataaaa gttccaagga ccagcagcct 601 cagatggaac tgccactcca aggctgtaac attacgtaca tcccgaaaga cagcaaaaag 661 aagaagcacg agctgaagat tactcagcag ggcacggacc cgcttgttct cgccgtccag 721 agcaaggaac aggccgagca gtggctgaag gtgatcaaag aagcctacag tggttgtagt 781 ggccccgtgg attcagagtg tcctcctcca ccaagctccc cggtgcacaa ggcagaactg 841 gagaagaaac tgtcttcaga gagacccagc tcagatgggg agggtgttgt ggaaaatgga 901 attaccacat gtaatggaaa ggagcaagtg aagaggaaga aaagttccaa atcagaggcc 961 aagggcactg tgtcgaaagt cactgggaaa aaaatcacca agatcatcag tctgggaaag 1021 aaaaagccgt ccacagacga gcagacctcc tcagctgagg aagatgttcc cacctgcggc 1081 tatctgaacg tgctctccaa cagccgctgg cgagagcgct ggtgccgagt gaaagataac 1141 aagctcattt tccacaagga caggaccgac ctgaagaccc atattgtgtc tattccgctc 1201 cgtggctgcg aggtgatccc gggtttggat tgtaaacatc ctctgacgtt ccggctgctg 1261 cgcaacggcc aggaggttgc agtattggag gcatcttctt ctgaagacat gggcaggtgg 1321 attgggattt tactcgcaga gacgggatcg tccacagacc cggaggctct gcactatgac 1381 tacattgatg tggagatgtc tgcaagtgtc attcagacag ccaaacagac cttctgtttc 1441 atgaacaggc gtgttatatc tgctaaccca tatctagggg gcacctccaa cggctatgcc 1501 caccccagcg ggacggcact tcattatgac gatgtcccgt gcatcaacgg ctcgctcaag 1561 ggtaaaaagc cccccgtggc gtctaatggg gtcacaggaa aagggaagac tctgagcagt 1621 cagccaaaga aagcggatcc cgcggctgtt gtgaaaagga cgggttcgaa tgctgcccag 1681 tacaagtatg gcaagaaccg ggtagaagca gatgccaagc ggctacagac caaagaggag 1741 gagctgctga agaggaaaga ggccctgcgg aataggctgg cccagctccg caaggaaaga 1801 aaagaccttc gagcggctat tgaagtgaac gccggcagga agccgcaggc gatcctggag 1861 gagaagctga agcagctgga ggaggagtgc cggcagaagg aggcggagcg tgtcagcctg 1921 gagctggagc tgacggaggt caaggagagc ctgaagaaag cgctggcggg cggagtcacc 1981 ctggggctgg ccatcgagcc caagtcaggg acatcgagtc cacagtctcc agtgttccgg 2041 caccggaccc tggaaaactc gcccatctcc agctgtgaca ccagtgacac cgagggcccc 2101 gtgccggtga acagcgcggc cgtcttgaag aagagccagg ctgccccggg cagctccccc 2161 tgccgagggc atgtgctgcg gaaggccaag gaatgggaat tgaagaacgg gacctagggg 2221 acagcagcac cactccagcc tcagagactg cacaccccct tgcctgtatc ctcatctgtg 2281 tgacggcagg aagctctgcc cagagtggcc tcagctgcac gactccagag gctccacgac 2341 tgagctctga ggccagtgcc tgtcccccag gcccacttgt attctttcta ctgtaaaatg 2401 gcgcctttaa aaaagatgta agactttggt tcccaacttt gttaaaaaaa aaaaaaaa //