LOCUS BC032675 2489 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 6, mRNA (cDNA
clone IMAGE:5575553), partial cds.
ACCESSION BC032675
VERSION BC032675.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2489)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2489)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: n Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52694676.
FEATURES Location/Qualifiers
source 1..2489
/db_xref="H-InvDB:HIT000092756"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5575553"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2489
/gene="SMC6"
/db_xref="GeneID:79677"
/db_xref="HGNC:HGNC:20466"
/db_xref="MIM:609387"
CDS 252..>2489
/gene="SMC6"
/codon_start=1
/product="SMC6 protein"
/protein_id="AAH32675.1"
/db_xref="GeneID:79677"
/db_xref="HGNC:HGNC:20466"
/db_xref="MIM:609387"
/translation="MAKRKEENFSSPKNAKRPRQEELEDFDKDGDEDECKGTTLTAAE
VGIIESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSWSAVVRSRLNATSASQVQAILL
FQPCGKSAVLTALIVGLGGRAVATNRGSSLKGFVKDGQNSADISITLRNRGDDAFKAS
VYGNSILIQQHISIDGSRSYKLKSATGSVVSTRKEELIAILDHFNIQVDNPVSVLTQE
MSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTKEQIHQGEERLTELKRQ
CVEKEERFQSIAGLSTMKTNLESLKHEMAWAVVNEIEKQLNAIRDNIKIGEDRAARLD
RKMEEQQVRLNEAEQKYKDIQDKLEKISEETNARAPECMALKADVVAKKRAYNEAEVL
YNRSLNEYKALKKDDEQLCKRIEELKKSTDQSLEPERLERQKKISWLKERVKAFQNQE
NSVNQEIEQFQQAIEKDKEEHGKIKREELDVKHALSYNQGQLKELKDSKTDRLKRFGP
NVPALLEAIDDAYRQGHFTYKPVGPLGACIHLRDPELALAIESCLKGLLQAYCCHNHA
DERVLQALMKRFYLPGTSRPPIIVSEFRNEIYDVRHRAAYHPDFPTVLTALEIDNAVV
ANSLIDMRGIETVLLIKNNSVARAVMQSQKPPKNCREAFTADGDQVFAGRYYSSENTR
PKFLSRDVDSEISDLENEVENKTAQILNLQQHLSTLEKDIKHNEELLKRCQLHYKELK
MKKKKK"
BASE COUNT 873 a 438 c 575 g 603 t
ORIGIN
1 ccacgcgtcc gctaccttct cctgcggccg gcacgcggtt cccagggggc cagcggcggt
61 cagccgaggt cgagacgccc gcagggtggc cttagcggcc ggtcgtacca cggcagcccc
121 gccgatcagg ttcctttggg agacttcgac ttgttggcga aatgaaccgg agaagaatcc
181 caattgggaa ttgcggaaaa caggactcta gggtagagaa aggttgtaga accaataggg
241 tttgagacct gatggccaaa agaaaggaag aaaatttttc ctctcctaaa aatgccaaaa
301 ggccaagaca agaagaattg gaggattttg ataaagatgg tgacgaagac gaatgtaaag
361 gtactacttt gactgcagca gaagttggaa taattgagag tattcaccta aaaaacttca
421 tgtgtcattc aatgcttgga ccttttaagt ttggttctaa tgtcaacttt gttgttggca
481 acaatggaag ttggagtgca gtggtgcgat ctcggctcaa tgcaacctct gcctcccagg
541 ttcaagcgat tctcctgttt cagccttgtg ggaagagtgc agtactcaca gctctcatag
601 tcggtcttgg tggaagagca gttgctacta atagaggatc ctctttaaaa ggttttgtga
661 aagatggaca gaactctgca gatatctcaa taacattgag gaacagagga gatgatgcct
721 ttaaagccag tgtgtatggt aactctatac ttatacagca acacatcagc atagatggaa
781 gtcgatctta taaacttaaa agtgcaacag gctccgtggt ttccacgagg aaagaagagc
841 tgattgcaat tcttgatcat tttaacatcc aggtggataa tccagtttct gttttaacac
901 aagaaatgag caagcagttc ttacagtcta aaaatgaagg agacaaatac aaattcttca
961 tgaaagcaac gcaacttgaa cagatgaagg aagattattc atacattatg gaaacgaaag
1021 aaagaacaaa ggagcagata catcaaggag aagagcggct tactgaacta aagcgccagt
1081 gtgtagagaa agaggaacgt tttcaaagta ttgctggttt aagtacaatg aagactaatt
1141 tagagtcctt gaaacatgaa atggcttggg cagtggtcaa tgaaattgaa aaacaattga
1201 atgccatcag agataatatc aaaattggag aagatcgtgc tgctagactt gacaggaaaa
1261 tggaagaaca gcaggtcaga cttaatgagg cagaacaaaa gtacaaggat attcaagaca
1321 aactagaaaa gattagtgaa gagacaaatg cacgagcacc agaatgtatg gcattgaaag
1381 cagatgttgt tgctaagaaa agggcctata atgaagctga ggttttatat aaccgatcct
1441 taaacgaata taaagcatta aagaaagatg atgagcagct ttgtaaacga attgaagagc
1501 tgaaaaaaag tactgaccaa tctttggaac ctgaacggtt ggaaagacaa aaaaaaatat
1561 cttggttaaa agagagagta aaggcctttc aaaatcaaga aaattcagtc aatcaagaga
1621 tcgaacagtt tcagcaagcc atagaaaagg acaaagaaga acatggcaaa attaagagag
1681 aagaattaga tgtgaagcat gcactgagct acaatcaggg gcaactgaaa gaattgaaag
1741 atagtaaaac tgatcgactc aaaagatttg gccctaatgt tccagctctt cttgaagcca
1801 tagatgatgc ttatagacaa ggacatttta cctataaacc tgtaggccct ttaggagctt
1861 gcattcatct tcgggaccca gaacttgctt tggctattga atcttgctta aaagggcttc
1921 tgcaggccta ttgttgccat aatcatgctg atgaaagggt ccttcaggca ctcatgaaaa
1981 ggttttattt accagggacc tcacggccac cgataatagt ttctgagttt cggaatgaga
2041 tatatgatgt aagacacaga gctgcttatc atccagactt tccaacagtt ctgacagctt
2101 tagaaataga taatgcggtt gtggcaaata gcctaattga catgagaggc atagagacag
2161 tgctactaat caaaaataat tctgtagctc gtgcagtaat gcagtcccaa aagccaccca
2221 aaaattgtag agaagctttt actgctgatg gtgatcaagt ttttgcagga cgttattatt
2281 catctgaaaa tacaagacct aagttcctaa gcagagatgt ggattctgaa ataagtgact
2341 tggagaatga ggttgaaaat aagacggccc agatattaaa tcttcagcaa catttatcta
2401 cccttgaaaa agatattaaa cacaatgagg aacttcttaa aaggtgccaa ctacattata
2461 aagaactaaa gatgaaaaaa aaaaaaaaa
//