LOCUS BC032654 3977 bp mRNA linear HUM 30-AUG-2007
DEFINITION Homo sapiens USO1 homolog, vesicle docking protein (yeast), mRNA
(cDNA clone MGC:45332 IMAGE:5533256), complete cds.
ACCESSION BC032654
VERSION BC032654.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3977)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3977)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505540.
FEATURES Location/Qualifiers
source 1..3977
/db_xref="H-InvDB:HIT000041654"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45332 IMAGE:5533256"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3977
/gene="USO1"
/gene_synonym="P115"
/gene_synonym="TAP"
/gene_synonym="VDP"
/db_xref="GeneID:8615"
/db_xref="HGNC:HGNC:30904"
/db_xref="MIM:603344"
CDS 157..3042
/gene="USO1"
/gene_synonym="P115"
/gene_synonym="TAP"
/gene_synonym="VDP"
/codon_start=1
/product="USO1 homolog, vesicle docking protein (yeast)"
/protein_id="AAH32654.1"
/db_xref="GeneID:8615"
/db_xref="HGNC:HGNC:30904"
/db_xref="MIM:603344"
/translation="MNFLRGVMGGQSAGPQHTEAETIQKLCDRVASSTLLDDRRNAVR
ALKSLSKKYRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNEEEEVEENST
RQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQII
LVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISE
EGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKV
TNLHLMLQLVRVLVSPTNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETIN
TVSEVIRGCQVNQDYFASVNAPSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFL
YKNQKGQGEIVSTLLPSTIDATGNSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQEN
ATQKEQLLRVQLATSIGNPPVSLLQQCTNILSQGSKIQTRVGLLMLLCTWLSNCPIAV
THFLHNSANVPFLTGQIAENLGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQL
IEKRIGKENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVIT
KAIYKSSEEDKKEEEVKKTLEQHDNIVTHYKNMIREQDLQLEELRQQVSTLKCQNEQL
QTAVTQQVSQIQQHKDQYNLLKIQLGKDNQHQGSYSEGAQMNGIQPEEIGRLREEIEE
LKRNQELLQSQLTEKDSMIENMKSSQTSGTNEQSSAIVSARDSEQVAELKQELATLKS
QLNSQSVEITKLQTEKQELLQKTEAFAKSVEVQGETETIIATKTTDVEGRLSALLQET
KELKNEIKALSEERTAIKEQLDSSNSTIAILQTEKDKLELEITDSKKEQDDLLVLLAD
QDQKILSLKNKLKDLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI"
BASE COUNT 1328 a 695 c 832 g 1122 t
ORIGIN
1 ccacgcgtcc gggagtggcc gccgagttgg aggcggtggt ggcagcagta ggagtgtgta
61 gagtgcggga ttgggggcca ggccctgcgg agggcggggg aagttgtctt cttttttttc
121 cggaggggcc ggtaaacctg gtggctgaac ggcaagatga atttcctccg cggggtaatg
181 gggggtcaga gtgccggacc ccagcacaca gaagccgaga cgattcaaaa gctttgtgac
241 agagtagctt catctacttt attggatgat cgaagaaatg ctgttcgtgc tctcaaatca
301 ttatctaaga aataccgctt ggaagtgggt atacaagcta tggaacatct tattcatgtt
361 ttacaaacag atcgttcaga ttctgaaata ataggttatg ctttggacac actatataat
421 ataatatcta atgaagaaga agaagtagaa gaaaattcca caagacagag tgaagatttg
481 ggaagccaat ttacagaaat tttcattaag cagcaggaaa atgtcactct tctgttatct
541 ttattggagg agtttgattt ccatgtccgc tggcctggtg tgaagcttct tacttctctt
601 ttaaaacaac tagggcctca ggtgcaacaa attattttag tcagtcctat gggtgtttca
661 agattgatgg acttactagc ggattccagg gaagttatac gtaatgatgg cgtcttacta
721 ctgcaggcac taacaagaag caatggtgca atccagaaaa ttgttgcttt tgaaaatgct
781 ttcgagagac tactggacat tatttcagag gaggggaaca gtgatggagg tatagtagtt
841 gaagattgtt tgattttgct ccaaaactta ttaaaaaaca acaactccaa tcaaaatttt
901 tttaaagaag gctcatatat tcaacgtatg aaaccttggt ttgaagttgg agatgaaaat
961 tctggctggt ctgcacagaa agtgaccaat ctacatctaa tgctacagct tgttcgtgta
1021 ttggtatctc ccaccaaccc tcctggtgct accagtagct gccagaaggc tatgttccag
1081 tgtgggttat tgcagcagct ttgtactatc ctaatggcta ctggggttcc tgctgatatc
1141 ctgactgaga ccataaatac tgtatcagaa gttattcgag gctgccaagt aaaccaagac
1201 tactttgcat ctgtaaatgc accttcaaac ccaccaagac cggcaattgt agtacttctc
1261 atgtccatgg ttaatgaaag gcagccattt gttttgcgct gtgctgttct ctattgtttc
1321 cagtgtttct tgtataaaaa ccaaaaagga caaggagaaa tcgtgtcaac acttttacct
1381 tctaccattg atgcaacagg taattcagtt tcagctggcc agttattatg tggaggtttg
1441 ttttctactg attcactttc aaactggtgt gctgctgtgg cccttgccca tgcgttgcaa
1501 gaaaatgcca cccagaaaga acagttgctc agggttcaac ttgctacaag tattggcaac
1561 cctccagttt ctttacttca acagtgcacc aatattcttt cacagggaag caaaatacaa
1621 acaagagttg gattattaat gttgctttgt acctggctaa gcaattgtcc cattgcagta
1681 acgcattttc ttcacaattc agccaatgtt ccattcctta caggacaaat tgcagaaaat
1741 cttggagaag aagagcagtt ggtccaaggc ttatgtgccc ttttgttggg catttcgatt
1801 tatttcaatg ataactcact tgagagctac atgaaagaga agctaaaaca actgattgag
1861 aagaggattg gcaaagagaa tttcatagag aaactaggat ttattagcaa acatgagttg
1921 tattccagag catctcagaa accccagcca aactttccca gtccagaata catgatattt
1981 gatcatgagt ttacgaagct ggtaaaagaa cttgaaggtg ttataactaa ggctatttat
2041 aagtccagtg aagaagataa aaaagaagaa gaggtgaaaa aaacattaga acagcatgac
2101 aatattgtga ctcactacaa aaatatgatt cgagagcaag atctccaact tgaggaatta
2161 aggcagcagg tttctacatt aaaatgtcaa aatgaacagc tccagacggc agtcacacag
2221 caagtatcac agatccagca gcacaaagac cagtataatc ttcttaaaat acagctagga
2281 aaagacaatc agcatcaagg ttcttacagt gagggggctc agatgaatgg cattcagcca
2341 gaagaaattg gtagattgcg agaagagata gaagaattaa aacgtaatca ggaactttta
2401 caaagccagc tgactgaaaa ggactctatg attgaaaata tgaaatcttc ccaaacatct
2461 ggcacaaatg aacagtcttc agcaatagtt tcagctagag attctgaaca agttgcagaa
2521 ttaaaacagg aactggcaac tttaaagtct cagttaaact cacaatctgt ggagatcacc
2581 aaactacaga cagaaaagca ggaactgtta cagaaaacag aagcgtttgc aaaatcagtt
2641 gaggtacaag gagagaccga gactataata gccaccaaaa ctactgatgt agaaggaaga
2701 ctgtcagcat tattacaaga gaccaaagag ttaaagaatg aaattaaagc tctgtctgag
2761 gaaagaactg ccattaaaga gcagctggat tcatctaata gtaccattgc cattttacaa
2821 actgagaaag acaaactaga gttggaaatt acagattcta aaaaagaaca agatgatctc
2881 ttggtgctct tggccgatca agatcagaaa atactgtcat tgaagaataa actcaaggat
2941 cttggtcatc cagttgaaga agaggatgaa cttgaatctg gagaccaaga ggatgaggat
3001 gatgaaagtg aagatcctgg caaggatcta gatcatatct agttttcaaa tctctaggaa
3061 caatagagat tatatcataa ctctgaagat ggactctaaa ctttggttta cctccatgga
3121 aaataaagat ttagaaacca ggtggaaaac attcactatt aagactattg atatattttt
3181 gtaatgttgc cacccatgtt gaaaacctta aaactgaatt tatgtagaac acacatcttt
3241 tatttaaatc catctgaact gtcccaaaat gtaatttgca aagagcttca aacaccaaaa
3301 atataccatt ttaaggcatg tggtgacaat gctatttgcc ttagttcatt cgttgtttac
3361 tttgcaaaat ttgtgacttt taagtactaa cacatttgat tgaatgtgta ttgaattgga
3421 attattattt ctaaattcag catttgagtc cttagttgat gattttcttt taaagaaatt
3481 agtttattta aaagcaagat agcctgggtt gggagttagt gcatatcatc agccctccat
3541 ctaatgtgat tgctaagatg tgcaggatag gacagcttag aatgagtgcc ttgacaccta
3601 catatggctg cattccatac ctcagtgaag aagccgaagg atgctgacac acagtgatgt
3661 ggagggcatt ccggagaaac ttttgcaaca gtgtattaat gtgattggtt ttctttttgt
3721 tttaagctaa acatctaaaa caaatttcaa gttaacagtt catacaactc agatttagta
3781 ttattgttta tcataaaaca tattatgttc ctagttttaa aaagacccaa agtatgatta
3841 atataattta ttggcatttt tgctgaatag gtttaagtca gataatagat tttaaaaaag
3901 caaatgaggc aatgtgtcaa aatttaatgt ttcataataa aaatagatac gttgacttaa
3961 aaaaaaaaaa aaaaaaa
//