LOCUS BC032386 2412 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens integrator complex subunit 6, mRNA (cDNA clone IMAGE:5176314), complete cds. ACCESSION BC032386 VERSION BC032386.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2412) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2412) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 64 Row: f Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 11024693 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2412 /db_xref="H-InvDB:HIT000092629" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5176314" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2412 /gene="INTS6" /gene_synonym="DBI-1" /gene_synonym="DDX26A" /gene_synonym="DICE1" /gene_synonym="DKFZP434B105" /gene_synonym="HDB" /gene_synonym="INT6" /gene_synonym="Notchl2" /db_xref="GeneID:26512" /db_xref="HGNC:HGNC:14879" /db_xref="MIM:604331" CDS 495..842 /gene="INTS6" /gene_synonym="DBI-1" /gene_synonym="DDX26A" /gene_synonym="DICE1" /gene_synonym="DKFZP434B105" /gene_synonym="HDB" /gene_synonym="INT6" /gene_synonym="Notchl2" /codon_start=1 /product="integrator complex subunit 6" /protein_id="AAH32386.1" /db_xref="GeneID:26512" /db_xref="HGNC:HGNC:14879" /db_xref="MIM:604331" /translation="MPILLFLIDTSASMNQRSHLGTTYLDTAKGAVETFMKLRARDPA SRGDRYMLVTFEEPPYAIKAGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLN RLVTGIDNYGQVG" BASE COUNT 689 a 518 c 498 g 707 t ORIGIN 1 ggctgagaaa gtggtgacac cgccggggtg cggagggagt ccctgaaact tctcccaaca 61 gccccagggc caatcttccc tcagcccact cccctcttcg ccagctccca ggtccccact 121 cctgtaccgg gggtggggtg gggagccagg cccgtctccc gctgggacac acacaggggc 181 cgggagcggg gacgggaccc ccgaggcggg ggggacgaac cgacagacag acggctgggc 241 gcccgcccca gcgggcaggc aggcaggagg aggcggaggc gggggtacga cggggagcac 301 tgggtctggg gagtttcctc tcaactatcg ggggagaaac tccccgcagc cggaggaaag 361 acccagacag tgttttcctc ccgggggccg tgctcccccg ccccgcgtag cggcggtcgc 421 cgccaccggc gcctccacct ctaccatctc ctctttctcc accacctcgg gccccggtgt 481 ccccggccag cactatgccc atcttactgt tcctgataga cacgtctgcc tctatgaacc 541 agcgcagcca tctgggcacc acctacctgg acacggccaa aggcgcggta gagaccttca 601 tgaagctccg tgcccgggac cctgccagca gaggagacag gtatatgctg gtcactttcg 661 aagagccgcc ctatgctatc aaggctggat ggaaagaaaa ccatgcaacg tttatgaatg 721 aattgaaaaa ccttcaggct gaaggactta cgactcttgg ccaatcccta aggacagctt 781 ttgatttatt aaatttaaat agattagtaa ctggcataga caactatggg caggtaggtt 841 gaataataag gtggcaaaat agttgatttt tcattttgtg gaaaaacaca gtccagtcca 901 aaaactacat aacatgaaat gcaagtataa aacattccaa attaaaatag aatatgcaca 961 ttgttcaaag gcaaaactct taccctacta tatatatttt acatccctca ttttttcccc 1021 ctctaaaatg cattggtatt caggattaga atctgaatct tttgctataa agttgacata 1081 cattggtttt aatcccttga aagttcagta aagacctaaa aggaaaagca tcctaccaca 1141 ccacactcat gttgtatgtg caactattat agtggcttag agacactagt tcgtgttctt 1201 cgtttctata ttagtaaaga tgttagagga aattaatctg tttgttgcat cagggtttaa 1261 tgtgaccatg ttgtataact attctgaaag gtaagaagtt tttcactgga gtacagtcac 1321 tggctgagaa catttaagtt ttcttttgaa gcatacacag ttaacaacta ttgcaggaag 1381 aactctgaat taaatttcag gcccagagtt ttgatttaaa ctccaaaccc ttggaaaaaa 1441 agactgctgg aaaatatgaa agaacccttc gtttcttaac ccccacaagt ccttttattg 1501 cacttacttt catgtatttg aggatgagag gagctttaaa tcaacaataa ttcactaagg 1561 aataatgcaa ggtggtctat tgtaacattt tatgatatta ttgccctgga aataaaagat 1621 actgaacaat gtataatgtt acatgtaaca aaggaatatt atttccaagg agctcagttc 1681 ttatgttgta gtgaaaagca ctattcctaa ttatatattg ggtatatgtt gtattttccc 1741 aagtcccaca gtccctagtt ttgtgagttt cgtacatttc agggaaattc tttctgtgac 1801 tacaactttt atttgcttcc tattgaagga aattgacttg tttctgtttt aggaaatttt 1861 aagcttctta gggataactt cagtgcttaa gtgtctttgg aaataactga atttagttct 1921 ataacattta aaatgtacac tgaaattcag agtgagctta ccaaattgaa cttccaacgt 1981 ttagttaggt aaatatgtac tttcttacca cattaatact tttatgtttt tcccatctct 2041 gctgctttta ttttgcaact tttaataatt taggtagatt tgcaatgaac tttttggttt 2101 gtttctgtaa aatagtagtg gatttccttc tcttttatat tcctttgtga tatgtagtgc 2161 aacacagtct tactgcttaa ggttttcatc cttacctctt tgagttcaaa gagatattta 2221 aaacttgcca ttatttggtt acctttattt ggttgtcatg ttgttagtgt atggcagaac 2281 tattagtttc ctctttttct gcatcacatt tcataagtgg tcaaggcatt tggacatatt 2341 cacctcctat tacctattaa aaatacttct taaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2401 aaaaaaaaaa aa //