LOCUS BC030990 969 bp mRNA linear HUM 13-JUN-2005
DEFINITION Homo sapiens zinc finger, DHHC-type containing 17, mRNA (cDNA clone
IMAGE:4105569), partial cds.
ACCESSION BC030990
VERSION BC030990.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 969)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 969)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: b Column: 12.
FEATURES Location/Qualifiers
source 1..969
/db_xref="H-InvDB:HIT000092260"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4105569"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..969
/gene="ZDHHC17"
/gene_synonym="HIP14"
/gene_synonym="HIP3"
/gene_synonym="HSPC294"
/gene_synonym="HYPH"
/gene_synonym="KIAA0946"
/db_xref="GeneID:23390"
/db_xref="MIM:607799"
CDS <1..831
/gene="ZDHHC17"
/gene_synonym="HIP14"
/gene_synonym="HIP3"
/gene_synonym="HSPC294"
/gene_synonym="HYPH"
/gene_synonym="KIAA0946"
/codon_start=1
/product="ZDHHC17 protein"
/protein_id="AAH30990.1"
/db_xref="GeneID:23390"
/db_xref="MIM:607799"
/translation="DRGGVTGAGEEGGGGPRRLRRGSRSPRARPPPRPSPGRVKRFLP
ACSGRRDLTPRWRTARMSTIPKRAVCPFSTQRYGIYERCRELVEAGYDVRQPDKENVT
LLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP
SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTR
LLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKAILRCHMAL
"
BASE COUNT 279 a 213 c 259 g 218 t
ORIGIN
1 gacagagggg gcgtcacggg ggcaggagaa gaaggaggag gaggcccgcg tcgcctccgg
61 cggggctcgc gctcgccccg cgctcgccct ccgcctcgcc cgagccccgg gagggtgaaa
121 cgctttctcc cagcatgcag cgggaggagg gatttaacac caagatggcg gacggcccgg
181 atgagtacga taccgaagcg ggctgtgtgc cccttctcca cccagagata tggaatatat
241 gaacgctgtc gagaattggt ggaagcaggt tatgatgtac ggcaaccgga caaagaaaat
301 gttaccctcc tccattgggc tgccatcaat aacagaatag atttagtcaa atactatatt
361 tcgaaaggtg ctattgtgga tcaacttgga ggggacctga attcaactcc attgcactgg
421 gccacaagac aaggccatct atccatggtt gtgcaactaa tgaaatatgg tgcagatcct
481 tcattaattg atggagaagg atgtagctgt attcatctgg ctgctcagtt cggacatacc
541 tcaattgttg cttatctcat agcaaaagga caggatgtag atatgatgga tcagaatgga
601 atgacgcctt taatgtgggc agcatataga acacatagtg tggatccaac tagattgctt
661 ttaacattca atgtttcagt taaccttggt gacaagtatc acaaaaacac tgctctgcat
721 tgggcagtgc tagcagggaa taccacagtc attagccttc ttctggaagc tggagctaat
781 gttgatgccc agaatatcaa ggcaatcctt aggtgtcaca tggccctcta gtggaaggga
841 tgctcagctg gaccgaggca actgcaggat attcccgggg agttgttacc caagggattg
901 cttttattca gggcgaatca gcgcttgatt tggcaaaaca aaaaaaaaaa aaaaaaaaaa
961 aaaaaaaaa
//