LOCUS BC028411 2568 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 213, mRNA (cDNA clone
MGC:33553 IMAGE:4822173), complete cds.
ACCESSION BC028411
VERSION BC028411.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2568)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2568)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57232751.
FEATURES Location/Qualifiers
source 1..2568
/db_xref="H-InvDB:HIT000091596"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33553 IMAGE:4822173"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2568
/gene="C1orf213"
/gene_synonym="FLJ90508"
/db_xref="GeneID:148898"
/db_xref="HGNC:HGNC:25122"
CDS 69..449
/gene="C1orf213"
/gene_synonym="FLJ90508"
/codon_start=1
/product="chromosome 1 open reading frame 213"
/protein_id="AAH28411.1"
/db_xref="GeneID:148898"
/db_xref="HGNC:HGNC:25122"
/translation="MLAVPVRLKVGSRKPEWGTNRLTSCPAKDPLDRRLQNLRDRERV
PEPQRSLRPGVQEDSREHRQVPEVSDPQVDLEFVDLQAKPRYRRLILKTQIPEASDSQ
AAQKPQAHRQIPETTEAGQETTSN"
BASE COUNT 633 a 611 c 680 g 644 t
ORIGIN
1 agcggggcgg cctcccgcac cgaagggacc ctgggcgtct gaggccctga tccgggcggg
61 ccttcaggat gttagcagtc cctgtccggt tgaaggtagg aagccgaaaa cccgagtggg
121 ggacgaacag acttacctcc tgtcccgcaa aagatccact agatcgtcgt ctccaaaacc
181 tgagagaccg cgaacgggtt ccagagccgc agcgttctct cagacctggc gttcaggaag
241 attctagaga gcacaggcag gtcccggagg tctcagaccc gcaggtagat ctcgaattcg
301 tagacttgca ggcgaagccc agatatcgta ggctgatcct aaagactcag attcccgagg
361 cctcagactc gcaggcagct cagaaaccac aggctcatag gcagatccct gagaccacag
421 aggctggcca agaaaccacc agcaactaag ctgcattcag ctggagttcc tcggaacggg
481 aggactcgca gctctccctt tccccagcca ggatgaggga attagacaat ggaagtcgag
541 cactggggaa agcaggcatt ctgcgtgggg aagagctccc agctcgctgt agccttggag
601 agggaagtga tggaaaaaga atatagcagc ttattaggga ctcccaccct cttcaagtta
661 taaatatccc cagaaccttg gctacgtgcc cggaagcctg ttgtctctaa ctgtacagga
721 gacttctctg cctgggctgg gaaaggggcc tttcttttgt tttgcagata gatccaccca
781 ctgaggaact tgaaaatttt tttcaaacat aactccaggc cttgctttta ttagtgagtg
841 tcctgttccc agtgcccggt tatttatgat taaattactg aagtgtctaa aaagaacaga
901 aggacccacc ccagccataa tgcagacttt cccattcctt ctctttccac ccgcaactgt
961 ggggctaaga attcttaaga tgtcacagaa ttataccatc ctacctcatc taaagtcgat
1021 ccgaggctgg tccgatggta gtgggttacc agaacttaat aacattaata actctaaagt
1081 tagtatacaa ccccccactg ctaaatttgg ctataaaaat aaaattgatc tgagcaccat
1141 ataaaatgga atcctggagg gtcccctaga ggcagtatcc ccagtgggaa gagcgtgggc
1201 ctcaaggtca gacaagcctg gtttggaatc caggctgtgt atcctttgga aagtcattga
1261 atccaggccc atttcctttt ctctaaaatg agggtcatca tacctaagga tgttgtgagg
1321 cgtgagtgag atgattaaag cgttccagag agtgcgctct tggatgatag ccgttacttt
1381 ttattaaccc tggctttggt ggtaagggaa acttccagaa atgcttgtgg gtatattgga
1441 tagctcagaa aatctgggaa atcaaagtgg ctcaatagct gtgaggaact gtgggtgact
1501 ttatcctcac atcgtgtttc ttccagaaat tcagacgcaa cagaggttag gccagtttgg
1561 tgggttccag tgagcggtgt gttgagccta gtagagcata ggtacttggg gttgccaaaa
1621 ccccagcaag ttgaggcttc acgctcaggg aaacttctgg gtcagaggtt aataaccacg
1681 ctccttggag caaggaggag gggagccttt ctgactagct gaagtaattg caggtttcta
1741 actgggccta aggtgagctg agggcttgag cccctcagcc cagcgggggt cccttttcat
1801 cccttctctg acagattgct ttgtaaactt tcttaggcct tccccccacc cctttgcccc
1861 agtgctttaa gcccttcttt gtcttcttgc tgtttctttt attcctcagg cctgcggggc
1921 gggggcgggg tggcgcccag gacgactccc cgggctcagc ttggctgcct gcctccttct
1981 gtaagtgctt tttttttctt cacctgggac cctctagagg ttggaaagag aagagaggct
2041 gggagcggat ggaaagcatg actgcatctg gagcccctgg ggggagtggg gaagagggag
2101 tggaaggaca gtggctgagg ggcttcctgt tgcagccttc agctggactc agggttgggg
2161 tcactggagg aggaggtggc ttcctgcccc attgttctgg actgcagtgt ttcttgggaa
2221 tacttactgt atgtggattt tcagtaacca acttggaaag ctgtatttgt tcccatgatt
2281 cagcaaacaa tgagtaccta ctgtgtgtag aagcagcagg acagcctgtc atcactggga
2341 aagaggccag aagagccgtt tggccagggt ctccaattta ggctttcaac attatctcta
2401 aagaaggtta tacattatgt cggttccact ggctgatggg atcaaagacc ctccttgtat
2461 atccttaaac ctgtactcta ttaccaggcc actgtgcctg tggagcactg taagttccta
2521 ccttttaata aattttataa ttatcttgtg agcaaaaaaa aaaaaaaa
//