LOCUS BC027918 856 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chemokine (C-C motif) ligand 21, mRNA (cDNA clone MGC:34555 IMAGE:5226781), complete cds. ACCESSION BC027918 VERSION BC027918.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 856) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 856) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 49 Row: n Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22165425. FEATURES Location/Qualifiers source 1..856 /db_xref="H-InvDB:HIT000040354" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34555 IMAGE:5226781" /tissue_type="Pancreas, Spleen, adult pooled" /clone_lib="NIH_MGC_120" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..856 /gene="CCL21" /gene_synonym="6Ckine" /gene_synonym="CKb9" /gene_synonym="ECL" /gene_synonym="MGC34555" /gene_synonym="SLC" /gene_synonym="TCA4" /db_xref="GeneID:6366" /db_xref="HGNC:HGNC:10620" /db_xref="MIM:602737" CDS 8..412 /gene="CCL21" /gene_synonym="6Ckine" /gene_synonym="CKb9" /gene_synonym="ECL" /gene_synonym="MGC34555" /gene_synonym="SLC" /gene_synonym="TCA4" /codon_start=1 /product="chemokine (C-C motif) ligand 21" /protein_id="AAH27918.1" /db_xref="GeneID:6366" /db_xref="HGNC:HGNC:10620" /db_xref="MIM:602737" /translation="MAQSLALSLLILVLAFGIPRTQGSDGGAQDCCLKYSQRKIPAKV VRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHLDKTPSPQKPAQG CRKDRGASKTGKKGKGSKGCKRTERSQTPKGP" BASE COUNT 254 a 253 c 211 g 138 t ORIGIN 1 cacagacatg gctcagtcac tggctctgag cctccttatc ctggttctgg cctttggcat 61 ccccaggacc caaggcagtg atggaggggc tcaggactgt tgcctcaagt acagccaaag 121 gaagattccc gccaaggttg tccgcagcta ccggaagcag gaaccaagct taggctgctc 181 catcccagct atcctgttct tgccccgcaa gcgctctcag gcagagctat gtgcagaccc 241 aaaggagctc tgggtgcagc agctgatgca gcatctggac aagacaccat ccccacagaa 301 accagcccag ggctgcagga aggacagggg ggcctccaag actggcaaga aaggaaaggg 361 ctccaaaggc tgcaagagga ctgagcggtc acagacccct aaagggccat agcccagtga 421 gcagcctgga gccctggaga ccccaccagc ctcaccagcg cttgaagcct gaacccaaga 481 tgcaagaagg aggctatgct caggggccct ggagcagcca ccccatgctg gccttgccac 541 actctttctc ctgctttaac caccccatct gcattcccag ctctaccctg catggctgag 601 ctgcccacag caggccaggt ccagagagac cgaggaggga gagtctccca gggagcatga 661 gaggaggcag caggactgtc cccttgaagg agaatcatca ggaccctgga cctgatacgg 721 ctccccagta caccccacct cttccttgta aatatgattt atacctaact gaataaaaag 781 ctgttctgtc ttcccaccca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 841 aaaaaaaaaa aaaaaa //