LOCUS BC027605 2374 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens neural precursor cell expressed, developmentally
down-regulated 1, mRNA (cDNA clone MGC:26881 IMAGE:4827191),
complete cds.
ACCESSION BC027605
VERSION BC027605.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2374)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2374)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC027605.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: a Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34303960.
FEATURES Location/Qualifiers
source 1..2374
/db_xref="H-InvDB:HIT000040284"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26881 IMAGE:4827191"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2374
/gene="NEDD1"
/gene_synonym="FLJ35902"
/db_xref="GeneID:121441"
/db_xref="HGNC:HGNC:7723"
/db_xref="MIM:600372"
CDS 168..2150
/gene="NEDD1"
/gene_synonym="FLJ35902"
/codon_start=1
/product="neural precursor cell expressed, developmentally
down-regulated 1"
/protein_id="AAH27605.1"
/db_xref="GeneID:121441"
/db_xref="HGNC:HGNC:7723"
/db_xref="MIM:600372"
/translation="MQENLRFASSGDDIKIWDASSMTLVDKFNPHTSPHGISSICWSS
NNNFLVTASSSGDKIVVSSCKCKPVPLLELAEGQKQTCVNLNSTSMYLVSGGLNNTVN
IWDLKSKRVHRSLKDHKDQVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHG
SNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVN
ELLFVTIGLDKRIILYDTSSKKLVKTLVADTPLTAVDFMPDGATLAIGSSRGKIYQYD
LRMLKSPVKTISAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAASGG
VQNSGIVREAPATSIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETDSGKN
QDFSSFDDTGKSSLGDMFSPIRDDAVVNKGSDESIGKGDGFDFLPQLNSVFPPRKNPV
TSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGKQESKDSFKQLAKLVTSGA
ESGNLNTSPSSNQTRNSEKFEKPENEIEAQLICEPPINGSSTPNPKIASSVTAGVASS
LSEKIADSIGNNRQNAPLTSIQIRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHM
QLNEMHSLLERYSVNEGLVAEIERLREENKRLRAHF"
BASE COUNT 769 a 447 c 487 g 671 t
ORIGIN
1 gggatgtgtc cggggaggcg cgggccgggg tcgcgcacct cccggagcct tgtggggtgt
61 gctgcctccg aaaagtttgc ctcgtctcca caagtctgtc tccttttttg tcaacctcaa
121 gtacttttct tttggcaggt acttggatgc attttacagg cgcagtcatg caggaaaacc
181 tcagatttgc ttcatcagga gatgatatta aaatatggga tgcttcatct atgacattgg
241 tggataaatt caacccacac acatcaccac atggaatcag ctcaatatgt tggagcagca
301 ataataactt tttagtaaca gcatcttcca gtggcgacaa aatagttgtc tcaagttgca
361 aatgtaaacc tgttccactt ttagagcttg ctgaagggca aaagcagaca tgtgtcaatt
421 taaattctac atctatgtat ttggtaagcg gaggcctaaa taacactgtt aatatttggg
481 atttaaaatc aaaaagagtt catcgatctc ttaaggatca taaagatcaa gtaacttgtg
541 taacatacaa ttggaatgat tgctacattg cttctggatc tcttagtggt gaaattattt
601 tacacagtgt aaccactaat ttatctagta ctccttttgg ccatggtagt aaccagtctg
661 ttcggcactt gaagtactcc ttgtttaaga aatcactact gggcagtgtt tcggataatg
721 gaatagtaac tctctgggat gtaaatagtc agagtccata ccataacttt gacagtgtac
781 acaaagctcc agcgtcaggc atctgttttt ctcctgtcaa tgaattgctc tttgtaacca
841 taggcttgga taaaagaatc atcctctatg acacttcaag taagaagcta gtgaaaactt
901 tagtggctga cactcctcta actgcggtag atttcatgcc tgatggagcc actttggcta
961 ttggatcttc ccgggggaaa atatatcaat atgatttaag aatgttgaaa tcaccagtta
1021 agaccatcag tgctcacaag acatctgtgc agtgtatagc atttcagtac tccactgttc
1081 ttactaagtc aagtttaaat aaaggctgtt caaataagcc cacaacagtg aacaaacgaa
1141 gtgttaatgt gaatgctgct agtggaggag ttcagaattc cggaattgtc agagaagcac
1201 ctgccacgtc cattgccaca gttctaccac aacctatgac atcagctatg gggaaaggaa
1261 cagttgctgt tcaagaaaaa gcaggtttgc ctcgaagcat aaacacagac actttatcta
1321 aggaaacaga cagtggaaaa aatcaggatt tctccagctt tgatgatact gggaaaagta
1381 gtttaggtga catgttctca cctatcagag atgatgctgt agttaacaag ggaagtgatg
1441 agtccatagg caaaggagat ggctttgact ttctaccgca gttgaactca gtgtttcctc
1501 caagaaaaaa tccagtaact tcaagtactt cagtattgca ttctagtcct cttaatgttt
1561 ttatgggatc tccagggaaa gaggaaaatg aaaaccgtga tctaacagct gagtctaaga
1621 aaatatatat gggaaaacag gaatctaaag actccttcaa acagttagca aagttggtca
1681 catctggtgc tgaaagtgga aatctaaata cctctccatc atctaaccaa acaagaaatt
1741 ctgagaaatt tgaaaagcca gagaatgaaa ttgaagccca gttgatatgt gaacccccaa
1801 tcaatggatc ctcaactcca aatccaaaga tagcatcttc tgtcactgct ggagttgcca
1861 gttcactctc agaaaaaata gccgacagca ttggaaataa ccggcaaaat gcaccattga
1921 cttccattca aattcgtttt attcagaaca tgatacagga aacgttggat gactttagag
1981 aagcatgcca tagggacatt gtgaatttgc aagtggagat gattaaacag tttcatatgc
2041 aactgaatga aatgcattct ttgctggaaa gatactcagt gaatgaaggt ttagtggctg
2101 aaattgaaag actacgagaa gaaaacaaaa gattacgggc ccacttttga aatttcagtg
2161 aataccttaa tgttctgtaa tttgggaagt ttctggcaac acagaactac atagaatcag
2221 tattgttttc atggcctcca gggaaaaaat gtttttcaag taagagtaaa agggtgatgg
2281 gattttatac caacaactgt ttcatcttaa aaatatgtat atttttatat taaaaattgt
2341 acagtatgtc atctacccaa aaaaaaaaaa aaaa
//