LOCUS BC026061 2231 bp mRNA linear HUM 26-APR-2004 DEFINITION Homo sapiens PAP associated domain containing 4, mRNA (cDNA clone MGC:16201 IMAGE:3640197), complete cds. ACCESSION BC026061 VERSION BC026061.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2231) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2231) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 24 Row: g Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..2231 /db_xref="H-InvDB:HIT000258988" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16201 IMAGE:3640197" /tissue_type="Pancreas, adenocarcinoma" /clone_lib="NIH_MGC_39" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2231 /gene="PAPD4" /gene_synonym="FLJ38499" /db_xref="GeneID:167153" CDS 452..1906 /gene="PAPD4" /gene_synonym="FLJ38499" /codon_start=1 /product="PAPD4 protein" /protein_id="AAH26061.1" /db_xref="GeneID:167153" /translation="MFPNSILGRPPFTPNHQQHNNFFTLSPTVYSHQQLIDAQFNFQN ADLSRAVSLQQLTYGNVSPIQTSASPLFRGRKRLSDEKNLPLDGKRQRFHSPHQEPTV VNQIVPLSGERRYSMPPLFHTHYVPDIVRCVPPFREIAFLEPREITLPEAKDKLSQQI LELFETCQQQISDLKKKELCRTQLQREIQLLFPQSRLFLVGSSLNGFGTRSSDGDLCL VVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIERPQLIRAKVPIVKFRDKVSCV EFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHQINDASRGTLSSYSLV LMVLHYLQTLPEPILPSLQKIYPESFSPAIQLHLVHQAPCNVPPYLSKNESNLGDLLL GFLKYYATEFDWNSQMISVREAKAIPRPDGIEWRNKYICVEEPFDGTNTARAVHEKQK FDMIKDQFLKSWHRLKNKRDLNSILPVRAAVLKR" misc_feature 1607..1771 /gene="PAPD4" /gene_synonym="FLJ38499" /note="PAP_assoc; Region: PAP/25A associated domain" /db_xref="CDD:pfam03828" BASE COUNT 686 a 461 c 433 g 651 t ORIGIN 1 ggcacgaggc tacgccgctt tttcggcgac tttttgctct tccgcttttt gccaccgccc 61 ccaaccttct atatccttgc agcccctacc ttttcttgtg ttgctcctcc cctggcagcc 121 gtgagggggg ttagatctca gccggagccg gagctgggcc tagctgtccc acgggccacc 181 actacctcct ttggttcggg agaaagctac gaccaagtac gcccagctcg ggccttagaa 241 cttctgaacg ggcagtgcgg gaccaaaaga ggaagatagt cttgggaccc ttgcatggtg 301 tttcaaaggg tggtgaagaa ctaaggggct ccagagcttg atatatttct gggaatttgg 361 aatatgctaa actagatttc tgccctagac taaacatctg gctgtggact caatgtagaa 421 gaatacatgt tcacttccag tgaacaagag catgttccca aactcaattt tgggtcgccc 481 acccttcact ccaaatcatc aacaacataa taacttcttt accctgtcac ctactgttta 541 ttcacaccag cagcttatag atgcacaatt caactttcag aatgcagact tgtctagagc 601 tgtgtcatta cagcagctga catatggaaa tgtcagtcca atacagacct cagcttcccc 661 attatttcga ggaaggaaga gattaagcga tgaaaaaaac cttcctcttg acggtaaacg 721 gcaacgtttc cattcacccc accaagagcc aactgtagtt aaccagatag tgcctttatc 781 aggtgaacga agatactcaa tgccaccatt gtttcataca cattatgtac cagatatagt 841 cagatgtgtt ccaccttttc gagaaattgc atttttagaa cctagagaaa tcacactgcc 901 tgaggccaaa gataagttga gtcagcagat actggagtta tttgaaacat gtcagcagca 961 aataagtgat ttaaagaaga aagaactctg tcgaacacag ctgcagagag aaattcagct 1021 gttatttcca caaagcagac tttttttggt tgggtcctct ttaaatggat ttggtacccg 1081 gagcagtgat ggtgatttat gcctagttgt taaggaagaa ccatgttttt ttcaggtaaa 1141 tcagaagact gaagcacggc atatactcac cttagtccat aaacacttct gtactagact 1201 ttcgggctac attgagagac ctcagctgat tcgagcaaaa gtgccaattg tgaagttcag 1261 ggataaagtc agttgtgtgg agtttgactt gaatgtaaac aatattgttg gaataagaaa 1321 cacattcctt ctcagaactt atgcatacct tgaaaatcga gttcgtccgt tagtgctggt 1381 gattaagaag tgggcaagtc accatcagat aaatgatgcc agtcgtggta ctttaagcag 1441 ctatagtctt gtattgatgg ttttgcacta tttacaaacc ctacctgaac ccatccttcc 1501 atccctccaa aaaatttacc cagagtcttt tagtcctgct atacagctgc accttgtaca 1561 tcaagctcca tgtaatgttc ctccttacct ctcaaagaat gaatcaaacc ttggggacct 1621 cttactgggc tttcttaaat attatgctac agaatttgac tggaatagtc aaatgatttc 1681 agttcgtgaa gccaaagcca ttccaaggcc tgatggtatt gaatggagaa ataaatacat 1741 ctgtgtagaa gaaccttttg atggaacaaa tacagccaga gcagtgcacg aaaagcagaa 1801 atttgatatg atcaaggatc aatttttaaa gtcatggcac agattgaaaa acaagagaga 1861 tttgaacagt atactacctg taagagctgc tgtcctgaaa agataactgg cctctatttc 1921 ttaataaatt cttccaagaa ataaagaaca atagtttcat cataatacat tatgtttacc 1981 tccatcatag ttgctttttt catagttctt gttttcatgt tttattttta aaaagacata 2041 taaagattgc atattttatt atgacatttc ctaataaacc cctttgattt aaaaatgtat 2101 ttttaaaaat gtttacattg atgatgagta atattgcatg tgttttcagg tgatcagata 2161 aaatatattt tgggaaatta actgaacaaa taaaaagttt ttgatataac ttcaaaaaaa 2221 aaaaaaaaaa a //