LOCUS BC025954 2017 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens nei endonuclease VIII-like 3 (E. coli), mRNA (cDNA clone MGC:39163 IMAGE:4853168), complete cds. ACCESSION BC025954 VERSION BC025954.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2017) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2017) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: g Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8922721. FEATURES Location/Qualifiers source 1..2017 /db_xref="H-InvDB:HIT000040038" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39163 IMAGE:4853168" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2017 /gene="NEIL3" /gene_synonym="FLJ10858" /gene_synonym="FPG2" /gene_synonym="hFPG2" /gene_synonym="hNEI3" /db_xref="GeneID:55247" /db_xref="HGNC:HGNC:24573" /db_xref="MIM:608934" CDS 74..1891 /gene="NEIL3" /gene_synonym="FLJ10858" /gene_synonym="FPG2" /gene_synonym="hFPG2" /gene_synonym="hNEI3" /codon_start=1 /product="nei endonuclease VIII-like 3 (E. coli)" /protein_id="AAH25954.1" /db_xref="GeneID:55247" /db_xref="HGNC:HGNC:24573" /db_xref="MIM:608934" /translation="MVEGPGCTLNGEKIRARVLPGQAVTGVRGSALRSLQGRALRLAA STVVVSPQAAALNNDSSQNVLSLFNGYVYSGVETLGKELFMYFGPKALRIHFGMKGFI MINPLEYKYKNGASRVLEVQLTKDLICFFDSSVELRNSMESQQRIRMMKELDVCSPEF SFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQI HHLMKMIRDFSILFYRCRKAGLALSKHYKVYKRPNCGQCHCRITVCRFGDNNRMTYFC PHCQKENPQHVDICKLPTRNTIISWTSSRVDHVMDSVARKSEEHWTCVVCTLINKPSS KACDACLTSRPIDSVLKSEENSTVFSHLMKYPCNTFGKPHTEVKINRKTAFGTTTLVL TDFSNKSSTLERKTKQNQILDEEFQNSPPASVCLNDIQHPSKKTTNDITQLSSKVNIS PTISSESKLFSPAHKKPKTAHYSSPELKSCNPGYSNSELQINMTDGPRTLNPDSPRCS KHNRLCILRVVRKDGENKGRQFYACPLPREAQCGFFEWADLSFPFCNHGKRSTMKTVL KIGPNNGKNFFVCPLGKEKQCNFFQWAENGPGIKIIPGC" BASE COUNT 624 a 419 c 446 g 528 t ORIGIN 1 gcgcagcgtt gagttgcaca gcggtattct caccaggccc tgcaatcggt gggccacagt 61 gccggccaca gagatggtgg aaggaccagg ctgtactctg aatggagaga agattcgagc 121 gcgggtgctc ccgggccagg cggtgaccgg cgtgcgggga agcgctctgc ggagtctgca 181 gggccgcgcc ttgcggctcg cagcctccac ggttgtggtc tccccgcagg ctgctgcact 241 gaataatgat tccagccaga atgtcttgag cctgtttaat ggatatgttt acagtggcgt 301 ggaaactttg gggaaggagc tctttatgta ctttggacca aaagctttac ggattcattt 361 cggaatgaaa ggcttcatca tgattaatcc acttgagtat aaatataaaa atggagcttc 421 tcgtgttttg gaagtgcagc tcaccaaaga tttgatttgt ttctttgact catcagtaga 481 actcagaaac tcaatggaaa gccaacagag aataagaatg atgaaagaat tagatgtatg 541 ttcacctgaa tttagtttct tgagagcaga aagtgaagtt aaaaaacaga aaggccggat 601 gctaggtgat gtgctaatgg atcagaacgt attgcctgga gtagggaaca tcatcaaaaa 661 tgaagctctc tttgacagtg gtctccaccc agctgttaaa gtttgtcaat taacagatga 721 acagatccat cacctcatga aaatgatacg tgatttcagc attctctttt acaggtgccg 781 taaagcagga cttgctctct ctaaacacta taaggtttac aagcgtccca attgtggtca 841 gtgccactgc agaataactg tgtgccgctt tggggacaat aacagaatga catatttctg 901 tcctcactgt caaaaagaaa atcctcaaca tgttgacata tgcaagctac cgactagaaa 961 tactataatc agttggacat ctagcagggt ggatcatgtt atggactccg tggctcggaa 1021 gtcggaagag cactggacct gtgtggtgtg tactttaatc aataagccct cttctaaggc 1081 atgtgatgct tgcttgacct caaggcctat tgattcagtg ctcaagagtg aagaaaattc 1141 tactgtcttt agccacttaa tgaagtaccc gtgtaatact tttggaaaac ctcatacaga 1201 agtcaagatc aacaggaaaa ctgcatttgg aactacaact cttgtcttga ctgattttag 1261 caataaatcc agtactttgg aaagaaaaac aaagcaaaac cagatactag atgaggagtt 1321 tcaaaactct cctcctgcta gtgtgtgttt gaatgatata cagcacccct ccaagaagac 1381 aacaaacgat ataactcaac tatccagcaa agtaaacata tcacctacaa tcagttcaga 1441 atctaaatta tttagtccag cacataaaaa accgaaaaca gcccactact catcaccaga 1501 gcttaaaagc tgcaaccctg gatattctaa cagtgaactt caaattaata tgacagatgg 1561 ccctcgtacc ttaaatcctg acagccctcg ctgcagtaaa cacaaccgcc tctgcattct 1621 ccgagttgtg aggaaggatg gggaaaacaa gggcaggcag ttttatgcct gtcctctacc 1681 tagagaagca caatgtggat tttttgaatg ggcagatttg tccttcccat tctgcaacca 1741 tggcaagcgt tccaccatga aaacagtatt gaagattgga cctaacaatg gaaagaattt 1801 ttttgtgtgt cctcttggga aggaaaaaca atgcaatttt ttccagtggg cagaaaatgg 1861 gccaggaata aaaattattc ctggatgcta atatctgtag attctctggc atttagtctc 1921 ttcaaactgt gtataatgtt tggtcctcct ctgtttcata gaaaagtcat agaatatgat 1981 acattgaaaa gttactgcaa aaaaaaaaaa aaaaaaa //