LOCUS BC025928 1184 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens retinitis pigmentosa 9 (autosomal dominant), mRNA (cDNA clone MGC:23258 IMAGE:4903338), complete cds. ACCESSION BC025928 VERSION BC025928.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1184) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1184) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 34 Row: o Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42718019. FEATURES Location/Qualifiers source 1..1184 /db_xref="H-InvDB:HIT000091134" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23258 IMAGE:4903338" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1184 /gene="RP9" /gene_synonym="PAP-1" /db_xref="GeneID:6100" /db_xref="HGNC:HGNC:10288" /db_xref="MIM:607331" CDS 19..684 /gene="RP9" /gene_synonym="PAP-1" /codon_start=1 /product="retinitis pigmentosa 9 (autosomal dominant)" /protein_id="AAH25928.2" /db_xref="GeneID:6100" /db_xref="HGNC:HGNC:10288" /db_xref="MIM:607331" /translation="MSSRPGREDVGAAGARRPREPPEQELQRRREQKRRRHDAQQLQQ LKHLESFYEKPPPGLIKEDETKPEDCIPDVPGNEHAREFLAHAPTKGLWMPLGKEVKV MQCWRCKRYGHRTGDKECPFFIKGNQKLEQFRVAHEDPMYDIIRDNKRHEKDVRIQQL KQLLEDSTSDEDRSSSSSSEGKEKHKKKKKKEKHKKRKKEKKKKKKRKHKSSKSNEGS DSE" BASE COUNT 400 a 250 c 313 g 221 t ORIGIN 1 ggcgctgcgg gggctgacat gtcgtcccgg cctgggcgcg aggacgtggg ggctgcgggc 61 gcgcggcggc cgcgtgagcc gccggagcag gagctgcagc gacgtcggga gcagaagcgg 121 cggcgacacg acgcgcagca gctgcagcag ctcaagcacc tggagtcctt ttacgaaaaa 181 cctcctcctg ggcttatcaa ggaagatgag actaagccag aagattgcat accagatgta 241 ccaggcaatg aacacgccag ggaatttctg gctcatgcac caactaaagg actttggatg 301 ccactgggga aagaagtcaa agttatgcag tgttggcgtt gcaaacgcta tggtcaccga 361 acgggtgaca aagaatgccc tttctttatc aaaggcaacc aaaagttaga gcagttcaga 421 gtggcacatg aagatcccat gtatgacatc atacgagaca ataaacgaca tgaaaaggac 481 gtaaggatac agcagttaaa acagttactg gaggattcta cctcagatga agataggagc 541 agctccagtt cctctgaagg taaagagaaa cacaagaaaa agaagaagaa agaaaagcat 601 aagaaaagga agaaagaaaa gaaaaagaag aaaaaacgga agcacaaatc ttccaagtca 661 aatgagggtt ctgactcaga gtgacaagga tgtgacttgt tcaacattct cttctcaaac 721 actgaccaag gaacagagga agatgcagtc agagaaagca gcaggataga gacgccgaga 781 gaggagtata tgtgggtcac agcagtgagc tcccacccgc cttgcagtga agatgtgacc 841 ccaggagagg gagtgtctcc ttccaggtgc tagctctgga cagcagctga ttttaggcag 901 gaaagtttct tcatcgttgt cctccctgct ggtcacatga gtttacgatt cctttgaagt 961 gtctcccaca gggtggcagg actgggagaa tctctgaggc gtgtcttcca ggccctccca 1021 cagcttgtgc cctccacagt gtggactcag gtcccataga catcaggctg gagtcttctc 1081 tgttgttgag aataataaaa gctcattatt tattttttaa aaaaaaaaaa aaaaaaaaaa 1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //