LOCUS BC025308 3132 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger CCCH-type, antiviral 1, mRNA (cDNA clone
MGC:39288 IMAGE:5418915), complete cds.
ACCESSION BC025308
VERSION BC025308.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3132)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3132)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33946332.
FEATURES Location/Qualifiers
source 1..3132
/db_xref="H-InvDB:HIT000258977"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39288 IMAGE:5418915"
/tissue_type="Brain, astrocytoma, grade IV"
/clone_lib="NIH_MGC_98"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..3132
/gene="ZC3HAV1"
/gene_synonym="FLB6421"
/gene_synonym="FLJ13288"
/gene_synonym="MGC48898"
/gene_synonym="ZAP"
/gene_synonym="ZC3H2"
/gene_synonym="ZC3HDC2"
/db_xref="GeneID:56829"
/db_xref="HGNC:HGNC:23721"
/db_xref="MIM:607312"
CDS 318..2417
/gene="ZC3HAV1"
/gene_synonym="FLB6421"
/gene_synonym="FLJ13288"
/gene_synonym="MGC48898"
/gene_synonym="ZAP"
/gene_synonym="ZC3H2"
/gene_synonym="ZC3HDC2"
/codon_start=1
/product="zinc finger CCCH-type, antiviral 1"
/protein_id="AAH25308.1"
/db_xref="GeneID:56829"
/db_xref="HGNC:HGNC:23721"
/db_xref="MIM:607312"
/translation="MADPEVCCFITKILCAHGGRMALDALLQEIALSEPQLCEVLQVA
GPDRFVVLETGGEAGITRSVVATTRARVCRRKYCQRPCDNLHLCKLNLLGRCNYSQSE
RNLCKYSHEVLSEENFKVLKNHELSGLNKEELAVLLLQSDPFFMPEICKSYKGEGRQQ
ICNQQPPCSRLHICDHFTRGNCRFPNCLRSHNLMDRKVLAIMREHGLNPDVVQNIQDI
CNSKHMQKNPPGPRAPSSHRRNMAYRARSKSRDRFFQGSQEFLASASASAERSCTPSP
DQISHRASLEDAPVDDLTRKFTYLGSQDRARPPSGSSKATDLGGTSQAGTSQRFLENG
SQEDLLHGNPGSTYLASNSTSAPNWKSLTSWTNDQGARRKTVFSPTLPAARSSLGSLQ
TPEAVTTRKGTGLLSSDYRIINGKSGTQDIQPGPLFNNNADGVATDITSTRSLNYKST
SSGHREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHD
SEEICLDHLCKGCPLNGSCSKVHFHLPYRWQMLIGKTWTDFEHMETIEKGYCNPGIHL
CSVGSYTINFRVMSCDSFPIRRLSTPSSVTKPANSVFTTKWIWYWKNESGTWIQYGEE
KDKRKNSNVDSSYLESLYQSCPRGVVPFQAGSRNYELSFQGMIQTNIASKTQKDVIRR
PTFVPQWYVQQMKRGPE"
BASE COUNT 774 a 795 c 804 g 759 t
ORIGIN
1 gaaccgagag ggggccaccc caggcggtca ccagcagatt tgcccgcgcg ttctctttct
61 ttccacccag ttgcccttgc ggccggctgt aaacctgcca ctaggacccg gtcggtgaga
121 tctagcctct tgacctgaga gccgagagtg gatcgctggg ctgggctaac ggcgacggag
181 agcgcgccct cgctgactcc gggcgcgccc agcagtagca ccgcccgcgc ccgcccctgg
241 acacttgtaa gtttcgattt ccgatttccg cggaaccgag tcccgcgccg cggcagagcc
301 agcacagcca gcgcgccatg gcggacccgg aggtgtgctg cttcatcacc aaaatcctgt
361 gcgcccacgg gggccgcatg gccctggacg cgctgctcca ggagatcgcg ctgtctgagc
421 cgcagctctg tgaggtgctg caggtggccg ggcccgaccg ctttgtggtg ttggagaccg
481 gcggcgaggc cgggatcacc cgatcggtgg tggccaccac tcgagcccgg gtctgccgtc
541 gcaagtactg ccagagaccc tgcgataacc tgcatctctg caaactcaac ttgctgggcc
601 ggtgcaacta ttcgcagtcc gagcggaatt tatgcaaata ttctcatgag gttctctcag
661 aagagaactt caaagtcctg aaaaatcacg aactctctgg actgaacaaa gaggaattag
721 cagtgctcct cctccaaagt gatccttttt ttatgcccga gatatgcaaa agttataagg
781 gagagggtcg gcagcagatt tgtaaccagc agccaccgtg ttcaagactc cacatctgtg
841 accacttcac ccgagggaac tgtcgttttc ccaactgcct ccggtcccat aacctgatgg
901 acagaaaggt gctggccatc atgagggagc acgggctgaa ccccgacgtg gtccagaaca
961 tccaggacat ctgcaacagc aagcacatgc agaagaatcc cccagggccc agagctcctt
1021 cttcacatcg tagaaacatg gcatataggg ctagaagcaa gagtagagat cggttctttc
1081 agggcagcca agaatttctt gcgtctgctt cagcgtctgc tgagaggtcc tgcacaccta
1141 gtccagatca gatcagccac agggcttccc tggaggacgc gcctgtggac gatctcaccc
1201 gcaagttcac gtatctgggg agtcaggatc gcgctcggcc tccctcaggc tcgtccaagg
1261 ctactgatct tggaggaaca agtcaggccg ggacaagcca gaggttttta gagaacggca
1321 gtcaagagga cctcttgcat ggaaatccag gcagcactta ccttgcttcc aattcaacat
1381 cagcccccaa ctggaagagc ctcacatcct ggacgaatga ccaaggcgcc aggagaaaga
1441 ctgtgttttc tcccacgcta cctgccgccc gctcttctct tggctctctg caaacacctg
1501 aagctgtgac caccagaaag ggcacaggct tgctttcctc agactacagg atcatcaatg
1561 gcaaaagtgg aactcaggac atccagcctg gccctctttt taataataat gctgatggag
1621 tggccacaga tataacttct accagatcct taaattacaa aagcactagc agcggtcaca
1681 gagaaatatc atcacctagg attcaggatg ctggacctgc ttcccgagat gtccaggcca
1741 ctggcagaat cgcagatgat gctgacccaa gagtagcact tgttaacgat tctttatctg
1801 atgtcacaag taccacatct tctagggtgg atgatcatga ctcagaggaa atttgtcttg
1861 accatctgtg taagggttgt ccgcttaatg gtagctgcag caaagtccac ttccatctgc
1921 cttaccggtg gcagatgctt attggtaaaa cctggacgga ctttgagcac atggagacga
1981 tcgagaaagg ctactgtaac cccggaatcc acctctgttc tgtaggaagt tatacaatca
2041 attttcgggt aatgagttgt gattcctttc ccatccgacg cctctccact ccttcttctg
2101 tcaccaagcc agccaattct gtcttcacca ccaaatggat ttggtattgg aagaatgaat
2161 ctggcacatg gattcagtat ggagaagaga aagacaaacg gaaaaattca aacgtcgact
2221 cttcatacct ggagtctctc tatcaatcct gtccgagggg agttgtgcca tttcaggcgg
2281 gctcacggaa ctatgagctg agtttccaag ggatgattca gacaaacata gcttccaaaa
2341 ctcaaaagga tgtcatcaga agaccaacat ttgtgcctca gtggtatgtg cagcagatga
2401 agagagggcc agagtaagtg ttctgaagca gctgtttgct gacagatgct tgagatgttc
2461 atgccctggg ctcatcaagt cactcgtgaa tctggagcct gttttcctga aaagttcctg
2521 tttgcattac tctgcagttt ccatttgcat tatcgatgag taagatgctt gttaagcagc
2581 atggtgtgac tgaaaggata ctagatcgga aaatgaattt tctttctgaa agggaagtct
2641 gagcgagtct cctaaatact ctgggcttta gcttctccag ctgtgaagag ctggattgat
2701 gcagtacacc taaggaataa tcatatatac tgggtttttg ttttgctgtg gattcttttt
2761 tttttttttt tttttttaga gggggtctca ctttgttgcc caggctggtc ttgaactcct
2821 gagctcaagt gatcctccta cctcagtctc ccaaagtgct gggattacag gcatgagcca
2881 ccgtgcctgg ctttgctgtg gattcttttg ggtgtctttt gttttcctac acgatttata
2941 gaggatgagg ggcggagaaa gagatagaaa aaagggatga gctagctgtt agagcaaggg
3001 ttttggtgag agataatatt gattgaaggg attttaaagg aaatgttgct gtgggggatt
3061 cattgtaact ctccttgtga actgctcagt aaactctaca ttgttcatga acaaaaaaaa
3121 aaaaaaaaaa aa
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