LOCUS BC025241 2180 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens zinc finger protein 394, mRNA (cDNA clone MGC:39096 IMAGE:4641268), complete cds. ACCESSION BC025241 VERSION BC025241.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2180) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2180) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: f Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31982908. FEATURES Location/Qualifiers source 1..2180 /db_xref="H-InvDB:HIT000039856" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39096 IMAGE:4641268" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2180 /gene="ZNF394" /gene_synonym="FLJ12298" /db_xref="GeneID:84124" /db_xref="HGNC:HGNC:18832" CDS 189..1874 /gene="ZNF394" /gene_synonym="FLJ12298" /codon_start=1 /product="zinc finger protein 394" /protein_id="AAH25241.1" /db_xref="GeneID:84124" /db_xref="HGNC:HGNC:18832" /translation="MNSSLTAQRRGSDAELGPWVMAARSKDAAPSQRDGLLPVKVEED SPGSWEPNYPAASPDPETSRLHFRQLRYQEVAGPEEALSRLRELCRRWLRPELLSKEQ ILELLVLEQFLTILPEELQAWVREHCPESGEEAVAVVRALQRALDGTSSQGMVTFEDT AVSLTWEEWERLDPARRDFCRESAQKDSGSTVPPSLESRVENKELIPMQQILEEAEPQ GQLQEAFQGKRPLFSKCGSTHEDRVEKQSGDPLPLKLENSPEAEGLNSISDVNKNGSI EGEDSKNNELQNSARCSNLVLCQHIPKAERPTDSEEHGNKCKQSFHMVTWHVLKPHKS DSGDSFHHSSLFETQRQLHEERPYKCGNCGKSFKQRSDLFRHQRIHTGEKPYGCQECG KSFSQSAALTKHQRTHTGEKPYTCLKCGERFRQNSHLNRHQSTHSRDKHFKCEECGET CHISNLFRHQRLHKGERPYKCEECEKSFKQRSDLFKHHRIHTGEKPYGCSVCGKRFNQ SATLIKHQRIHTGEKPYKCLECGERFRQSTHLIRHQRIHQNKVLSAGRGGSRL" BASE COUNT 621 a 514 c 628 g 417 t ORIGIN 1 gttttcggtt gtttgaccga gagagttgta ggcgcaaagc tgaggaaagg agagtgtgga 61 gaggggcctg gtgtggtggg gcccggtgtt tgggaccgga gggtgttgac ggctgatgag 121 ttccttgggt ttgctctttc ttcacctgaa aagaagactc caggaagggc agcacatgcc 181 ggagaaagat gaattccagc ttgaccgccc agaggcgcgg cagtgacgcc gagttgggac 241 cctgggtgat ggctgcgagg tccaaggacg cggcgccgtc ccaacgcgac ggacttttgc 301 ccgtgaaagt ggaggaagac tcacccggaa gttgggagcc caactatccc gcggcttcgc 361 cggaccccga aacttctcga ctgcacttta ggcagctgcg ttaccaggag gtggctggac 421 cggaagaggc gctgagccgg ctccgagaac tctgtcgtcg gtggctgaga cccgagctgc 481 tctccaagga gcagatcctg gagctgctgg tgctggagca gttcctcacc atcctgcccg 541 aggagcttca agcctgggtg cgagagcact gcccagagag cggggaggag gcggtggccg 601 tggtgcgggc tctgcagcga gcgctcgatg gaacctcatc ccaggggatg gtgactttcg 661 aggacacggc tgtgtctcta acctgggagg agtgggagcg cctggaccca gcacggaggg 721 acttctgcag agagagtgcg cagaaggatt ccgggagcac agttccgccg agtttggaaa 781 gcagagtgga gaacaaagag ttgattccaa tgcaacaaat tttagaagaa gcggagccac 841 aggggcaact acaagaagcg ttccagggga agcgccccct gttttctaag tgtggcagta 901 cccatgagga cagggtggaa aagcagtccg gagacccctt gcccctgaaa cttgaaaatt 961 ctcctgaagc agaaggactc aacagcatct cagatgtcaa taagaatggt tccatagaag 1021 gggaagactc taaaaataat gaattgcaga acagtgccag gtgttccaac cttgttctat 1081 gtcagcacat cccgaaagca gagaggccca ctgacagtga ggaacacggg aacaagtgca 1141 agcaaagttt ccacatggtg acgtggcacg tgctgaaacc tcacaagtct gacagtggag 1201 acagtttcca tcattccagc ctttttgaga cccagaggca gctccatgaa gaaagacctt 1261 ataaatgtgg taactgtggg aagagtttca aacaacgctc tgacctcttt agacaccaga 1321 gaatccacac aggtgagaaa ccctatggct gccaagaatg tgggaaaagc ttcagccaga 1381 gtgctgccct gaccaagcac cagaggacac acacaggcga gaagccgtac acctgtctga 1441 aatgtgggga gcgcttcagg cagaattcac acctaaatcg tcatcaaagt acccacagta 1501 gagacaaaca ttttaaatgt gaggaatgcg gggaaacctg tcatatttcc aaccttttta 1561 gacatcagag actacataaa ggggaaagac cctataagtg tgaagaatgc gagaagagct 1621 tcaaacagcg ctctgacctc tttaaacacc acagaatcca cactggggag aagccctatg 1681 gatgttccgt ctgtgggaaa cgcttcaatc agagtgcaac cctcattaaa caccagagaa 1741 ttcacactgg ggaaaagcct tacaaatgtc ttgaatgtgg ggaaagattt agacaaagta 1801 cacaccttat ccgacaccaa agaattcatc aaaataaagt gctgtcggct gggcgtggtg 1861 gctcacgcct ataatcccag cactttggga ggccaaggca ggcagatcat ttgagatcag 1921 gagtttgaaa ccagcctggc caacatggta aaatcctgtc tctactaaaa atacaaaaat 1981 gagccgggca tggtggtgca tgcctgtaag cccagctatt cgggaggctg aggtaggaga 2041 atcacttgaa cccaggaggc ggaagttgca gtgagctgag atcatgccac tgcactccag 2101 cctgggcaac agagcgagac tccatctcaa aaaagaaata aagtgctgtc attttgaaaa 2161 aaaaaaaaaa aaaaaaaaaa //