LOCUS BC024182 4418 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens zinc finger protein 10, mRNA (cDNA clone MGC:26561
IMAGE:4823159), complete cds.
ACCESSION BC024182
VERSION BC024182.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4418)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4418)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC024182.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38045950.
FEATURES Location/Qualifiers
source 1..4418
/db_xref="H-InvDB:HIT000039752"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26561 IMAGE:4823159"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4418
/gene="ZNF10"
/gene_synonym="KOX1"
/db_xref="GeneID:7556"
/db_xref="HGNC:HGNC:12879"
/db_xref="MIM:194538"
CDS 188..1909
/gene="ZNF10"
/gene_synonym="KOX1"
/codon_start=1
/product="zinc finger protein 10"
/protein_id="AAH24182.1"
/db_xref="GeneID:7556"
/db_xref="HGNC:HGNC:12879"
/db_xref="MIM:194538"
/translation="MDAKSLTAWSRTLVTFKDVFVDFTREEWKLLDTAQQIVYRNVML
ENYKNLVSLGYQLTKPDVILRLEKGEEPWLVEREIHQETHPDSETAFEIKSSVSSRSI
FKDKQSCDIKMEGMARNDLWYLSLEEVWKCRDQLDKYQENPERHLRQVAFTQKKVLTQ
ERVSESGKYGGNCLLPAQLVLREYFHKRDSHTKSLKHDLVLNGHQDSCASNSNECGQT
FCQNIHLIQFARTHTGDKSYKCPDNDNSLTHGSSLGISKGIHREKPYECKECGKFFSW
RSNLTRHQLIHTGEKPYECKECGKSFSRSSHLIGHQKTHTGEEPYECKECGKSFSWFS
HLVTHQRTHTGDKLYTCNQCGKSFVHSSRLIRHQRTHTGEKPYECPECGKSFRQSTHL
ILHQRTHVRVRPYECNECGKSYSQRSHLVVHHRIHTGLKPFECKDCGKCFSRSSHLYS
HQRTHTGEKPYECHDCGKSFSQSSALIVHQRIHTGEKPYECCQCGKAFIRKNDLIKHQ
RIHVGEETYKCNQCGIIFSQNSPFIVHQIAHTGEQFLTCNQCGTALVNTSNLIGYQTN
HIRENAY"
BASE COUNT 1405 a 792 c 897 g 1324 t
ORIGIN
1 agactcacct ctgacgccgc tcttcgcgct ccgctggtga atggagtcgc gttctctgtt
61 ttgctgttgc tgctgccttt gtgacgggat cgctttctcc catcgaacct tctagttgct
121 tattgcagct ttgtctcctc agcactctgc tgtcactcaa ggaagtatca tcaagaacaa
181 ggagggcatg gatgctaagt cactaactgc ctggtcccgg acactggtga ccttcaagga
241 tgtatttgtg gacttcacca gggaggagtg gaagctgctg gacactgctc agcagatcgt
301 gtacagaaat gtgatgctgg agaactataa gaacctggtt tccttgggtt atcagcttac
361 taagccagat gtgatcctcc ggttggagaa gggagaagag ccctggctgg tggagagaga
421 aattcaccaa gagacccatc ctgattcaga gactgcattt gaaatcaaat catcagtttc
481 cagcaggagc atttttaaag ataagcaatc ctgtgacatt aaaatggaag gaatggcaag
541 gaatgatctc tggtatttgt cattagaaga agtctggaaa tgtagagacc agttagacaa
601 gtatcaggaa aacccagaga gacatttgag gcaagtggca ttcacccaaa agaaagtact
661 tactcaggag agagtctctg aaagtggtaa atatggggga aactgtcttc ttcctgctca
721 gctagtactg agagagtatt tccataaacg tgactcacat actaaaagtt taaaacatga
781 tttagttctt aatggtcatc aggacagttg tgcaagtaac agtaatgaat gtggtcaaac
841 tttctgtcaa aacattcacc ttattcagtt tgcaagaact cacacaggtg ataaatccta
901 caaatgccct gataatgaca actctcttac tcatggttca tctcttggta tatcaaaggg
961 catacataga gagaaaccct atgaatgtaa ggaatgtgga aaattcttca gctggcgctc
1021 taatcttact aggcatcagc ttattcatac tggagaaaaa ccgtatgagt gtaaagaatg
1081 tggaaagtct ttcagccgga gttctcacct cattggacat caaaagaccc atactggtga
1141 ggaaccctat gaatgtaaag aatgtggaaa atccttcagc tggttctctc accttgttac
1201 tcatcagaga actcatacag gagacaaact gtacacatgt aatcagtgtg ggaaatcttt
1261 tgttcatagc tctaggctta ttagacacca gaggacacat actggagaga aaccctatga
1321 atgtcctgaa tgtgggaaat ctttcagaca gagcacacat ctcattctgc atcagagaac
1381 ccatgtgaga gtgaggccct atgaatgcaa tgaatgtgga aagtcttaca gccagagatc
1441 tcaccttgtt gtgcatcata gaattcacac tggactaaaa ccttttgagt gtaaggattg
1501 tggaaaatgt tttagtcgaa gctctcacct ttattcacat caaagaaccc acactggaga
1561 gaaaccatat gagtgtcatg attgtggaaa atctttcagc cagagttctg cccttattgt
1621 gcatcagagg atacacactg gagagaaacc atatgaatgc tgtcagtgtg ggaaagcctt
1681 catccggaag aatgacctca ttaagcacca gagaattcat gttggagaag agacctataa
1741 atgtaatcaa tgtggcatta tcttcagcca gaactctcca tttatagttc atcaaatagc
1801 tcacactgga gagcagttct taacatgcaa tcaatgtggg acagcgcttg ttaatacctc
1861 taaccttatt ggataccaga caaatcatat tagagaaaat gcttactaat aaatatggga
1921 atttttcaca aagagcaatg actttatttt gcattggaga actcctggag ataagctgta
1981 caaattgaat ctatgtggaa atgctttcag tcttgttact atcctattgc acattagaga
2041 attggtcctg gaagggaaag aaaccacaga ttttatttca gtacacaaat ccatcagatt
2101 ttcttctttt catgaattcc tacagaagta attggcctga gagcattctt gaccaagtct
2161 taaatgctag aatctgagaa ggaattatta aataggtgag ttgttgagcg agaaccactt
2221 catttgaaaa gaaatgagta tgctactata gggagagttg ttgctgagaa ttaagaaatg
2281 atacagttaa tgcaacaaaa gatggaaaat aatatttcag tcaatatgtc attgttttct
2341 tgactatgtc tctcttctgg gacatttagt agtgtttggt atgttttatg tgtctggtag
2401 aaaccatatt ttggttaaca gcaagaaaaa tgcttataat gtagtacaat taaaaacaac
2461 acatctccac taccagtgct aacccatttt taagtacatt tgcatgtggg caagaattga
2521 aagtatacag ataattgaac agaattgatt tgttagataa ggagattttg actgagtttt
2581 atagtctgtt taatgttgct gtaataatta ttttaagaaa cttttaaata ttgtaagagg
2641 atatctagtt tctctattct accatcaaag aagcttttga gtaccacctg ttaatgagct
2701 ttcctattct aaattgtttt gggtcacaga gttccacttt ttccactctt attagcactg
2761 caaaagctcc tgagaattta aaaacacagt aattctctgg atgttaggac ctaggggaac
2821 attgggcatt tgaacatatc agggagggtc cccattttag tgggaacaag tatttaaaca
2881 atatttagag caagtgtcct catgtgataa acagagcaca gtccaaagat accctctttc
2941 tcaaggtagt cttttatctt tataaagaaa gattagtgtt taagagcgta gacttgagct
3001 agactaccca ggttgaaacc ccactagctg ggtgatcttg aacatgctgc ttagcttctc
3061 tgtgccaaac ttactgatat cctcatctgt aaattagcga taataatagt acttacctgg
3121 taggattatg gtgagtatta aatgagtaaa tggaaacagc ttagaatagt gcctgacata
3181 tattatgttc tctgtagtta ctggctgtga ttattaataa tattgccgca ccctaatatc
3241 tgttatttaa ttgaaatctg cttgtgtgct tataagaatt tactgagttc tcacttccct
3301 tacagtcata catggttttt cccttttgcc taaatcagaa ctcaacagcc tgggaaaatc
3361 actgacaaat agtggatata ggtttcattt ctgaggatca ataaacagct tgtaatgttg
3421 tatacacatt tattctgttt gtacaaaggt tttccattct atggagagga tcccagtctt
3481 cagattctct ggtaagttaa taacccacaa aagattcagg aagaggatct attttaattt
3541 tctctttcat tctataaatc agtctgttgt atatagggac tgaccatgat tctccatttt
3601 ctggcataaa tattagctgc tcaatgattg attgttgaat gatagatgaa gtattgctga
3661 agccaaccag agatcttgat ctctctctga ggaaaaaacc tagaaatgat ggttagaatc
3721 aggagacttg agaactacga ggaacatggc agcctctagc tcatacttgt cgttgtacaa
3781 ttgagatcaa gtgaattggc cccggtctca cattttcagt gaagtcagac tcagaactag
3841 gtcctgggtt tcatgtttcc tgctgctctt ctcactgtgt acacaccatg cccacataca
3901 acatacctat cagaaatggt tttcattaag ggagtagaat agtcacttaa ctggggctct
3961 taacattgct aataacctgt ggctcaattt cctcaactgt ataatgaggt tactactagt
4021 atctacctca aagcgttgtc atgtggattg agatgatatg tatgaatcac ataaaagagt
4081 gcctggcaca tagtaggtgc cattaataat attactattg ttaacacctt aagggtctaa
4141 cttgtaatga agacagaaat atgtatgagg atgatcactg aaatatttat gacagtgcat
4201 aatttgcaaa ataaaaaatg tacactagca taatatttgt ggcatatccg tgtaatggaa
4261 gattatgcag gcattaaaat atgtacacaa aaagtttggt aaaggaaaaa tgctgtcatg
4321 tgttacaaaa gcatgataaa taattgttaa tatggaataa gctcaaatat gtcaaaataa
4381 atgtaaaaaa tgagtgttgc tcaaaaaaaa aaaaaaaa
//