LOCUS BC022846 2795 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens zinc finger and SCAN domain containing 18, mRNA (cDNA
clone MGC:15014 IMAGE:3926192), complete cds.
ACCESSION BC022846
VERSION BC022846.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2795)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2795)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC022846.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: b Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147626.
FEATURES Location/Qualifiers
source 1..2795
/db_xref="H-InvDB:HIT000039649"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15014 IMAGE:3926192"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2795
/gene="ZSCAN18"
/db_xref="GeneID:65982"
/db_xref="HGNC:HGNC:21037"
CDS 401..1933
/gene="ZSCAN18"
/codon_start=1
/product="zinc finger and SCAN domain containing 18"
/protein_id="AAH22846.1"
/db_xref="GeneID:65982"
/db_xref="HGNC:HGNC:21037"
/translation="MLPLEKAFASPRSSPAPPDLPTPGSAAGVQQEEPETIPERTPAD
LEFSRLRFREFVYQEAAGPHQTLARLHELCRQWLMPEARSKEQMLELLVLEQFLGILP
DKVRPWVVAQYPESCKKAASLVEGLADVLEEPGMLLGSPAGSSSILSDGVYERHMDPL
LLPGELASPSQALGAGEIPAPSETPWLSPDPLFLEQRRVREAKTEEDGPANTEQKLKS
FPEDPQHLGEWGHLDPAEENLKSYRKLLLWGYQLSQPDAASRLDTEELRLVERDPQGS
SLPEGGRRQESAGCACEEAAPAGVLPELPTEAPPGDALADPPSGTTEEEEEQPGKAPD
PQDPQDAESDSATGSQRQSVIQQPAPDRGTAKLGTKRPHPEDGDEQSLEGVSSSGDSA
GLEAGQGPGADEPGLSRGKPYACGECGEAFAWLSHLMEHHSSHGGRKRYACQGCWKTF
HFSLALAEHQKTHEKEKSYALGGARGPQPSTREAQAGARAGGPPESVEGEAPPAPPEA
QR"
BASE COUNT 554 a 827 c 912 g 502 t
ORIGIN
1 gggcggctgg gaccggcctg gggtagctgc gcagcaggtg ggtcggtccc ggggatgcag
61 cgcgggggtc agagagcgac cccaacaggg tagacggtga ggacgcctca gtgggcagcg
121 ttagggaaag gggccagggt gttcccgggg ttggggtgcg agcccccgct gtgcgtccag
181 gaggccgagg gtctggcatc ccttcgcgtg gagtgcgggg caggggccgg gtccccccgg
241 aggtggctga gatccagatc ggtgaggggc cctgcaggca ggtctgtggg ttctggcacc
301 acctgagccc actgggcatc tggtcatccc tggcacctct cctttggagc caccttgtcc
361 ctggctagac agtcacattt tccagtgccg ttttggaaag atgttgcctt tggagaaggc
421 gtttgcctcc cccaggagct ccccagcccc gccggatctg cccacgccgg ggtcagcagc
481 cggagtccag caggaagaac ccgagaccat ccctgagagg acccctgctg acctggagtt
541 ctcccgcctg cgtttccggg aatttgtcta ccaggaggct gccgggcccc accagaccct
601 ggcccggctg catgagctgt gccgccagtg gctgatgcct gaggcgcgct ccaaggagca
661 gatgctggag ctgctggtgc tggagcagtt cctgggcatc ctgcctgata aggtccggcc
721 ctgggtggtg gcacagtacc ctgagagctg caagaaggca gcctccctgg tggagggcct
781 cgctgatgtc ctggaagagc cagggatgct gctgggctcc cctgcgggct catcctcaat
841 tcttagcgat ggagtgtacg agaggcacat ggaccctctg ctgctaccag gcgagctcgc
901 gagccccagc caggcccttg gagctgggga gatcccggca ccttctgaga caccctggct
961 ttctccggac cccctgtttc tggaacagag gagggtcaga gaagcaaaga ccgaagagga
1021 cggccctgcc aacaccgagc agaagctgaa gtcctttcca gaggaccctc agcacctggg
1081 ggagtggggc cacctggacc ctgccgagga gaacctgaag agctaccgga agctgctcct
1141 gtgggggtat cagctttccc agcctgacgc tgcctccagg ctggacactg aggaactccg
1201 gttggtggaa agagatccac aaggaagcag cctcccagaa ggcgggaggc ggcaggagag
1261 cgctgggtgc gcctgcgagg aggccgcccc cgcgggggtg ctgcctgagc tgcctacgga
1321 ggcgccccct ggggacgccc ttgccgatcc cccgtcgggc accactgagg aggaggaaga
1381 gcagcctggg aaggccccgg acccgcagga cccccaggac gcggagtccg actctgccac
1441 cggatcgcag aggcagtccg tcatccagca gcctgccccg gacaggggca cggcgaaact
1501 gggaaccaag aggccgcacc ccgaggatgg ggacgagcag agcctcgagg gcgtctctag
1561 ctccggcgac agcgcagggc tggaggccgg gcagggccct ggggctgacg agccgggctt
1621 gtcccgcggg aagccctatg cctgcggcga gtgcggggag gccttcgcgt ggctctcgca
1681 cctgatggag caccacagca gccatggcgg ccggaagcgc tacgcctgtc agggctgctg
1741 gaagaccttc cacttcagcc tggccctagc cgagcaccag aagacccacg agaaggagaa
1801 aagctacgcg ctggggggcg cccggggccc ccaaccgtcc acccgcgaag cccaggcggg
1861 ggctagggcg ggcggtcccc cagagagcgt ggagggcgag gctccccccg cacccccaga
1921 ggcgcagagg tgagccgctg tgctgtcccg ttccggaggg gccgctttgc cggccgtgaa
1981 tcccagacga ggcattgggc ctttccacgc ccctgggtgg cggcttcctg tggtgtttgt
2041 ggacgtcctc tgcctgtgcc ctgaatccgc tcctgaggct aagcgctccc aacgagaagg
2101 gtccacggga agccctcacc tctgtaaaca caccctgggc cagcgctcgc atccgagggg
2161 agccgccgga tgtggaagaa gactcggctt tcctgcagcc atttagtgcc gccccatgct
2221 aggttatttg acattgtgca gtgtagagtt gccttaaagt gcgtgatctg ccagtgcttt
2281 cttcaagtca cccttgcccc gattcctcct gtttgcgctc cccagggttg ctcaagtgga
2341 aattttgtca gctgtttagc cttttcgtac ttggcgtgat gtcaacttca cttctaatct
2401 gcaaaagcag aagctgtttc ctagtttacc tcgcgtgtgt ttacctatat ggagtagctc
2461 gcagagatca cagaaatgct tgcagcctaa ggcagggttt tcagaccgtg ggtcccagcc
2521 catttagtaa aatgggaaat caattagcaa gtggtcacca gcattacaca gcaatgaagc
2581 agaataaagt aggccagaat gcatcatgta gtaaaggcaa atactgtttt gtgaaacttt
2641 tcacccatac atctaaatgt gagaactggt tgcaatgtaa gacatttctt gctgggaagt
2701 tgtgagcaaa ataagttgaa aacactaata aagatctgtc tgtctgagca aaggagacta
2761 aactccttgg gctacataaa aaaaaaaaaa aaaaa
//