LOCUS BC022518 2370 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens synaptoporin, mRNA (cDNA clone MGC:26651 IMAGE:4792167), complete cds. ACCESSION BC022518 VERSION BC022518.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2370) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2370) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: a Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32401419. FEATURES Location/Qualifiers source 1..2370 /db_xref="H-InvDB:HIT000039597" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26651 IMAGE:4792167" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2370 /gene="SYNPR" /gene_synonym="MGC26651" /gene_synonym="SPO" /db_xref="GeneID:132204" /db_xref="HGNC:HGNC:16507" CDS 119..916 /gene="SYNPR" /gene_synonym="MGC26651" /gene_synonym="SPO" /codon_start=1 /product="synaptoporin" /protein_id="AAH22518.1" /db_xref="GeneID:132204" /db_xref="HGNC:HGNC:16507" /translation="MCMVIFAPLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIA FAYPFRLHQVTFEVPTCEGKERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIF FQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQ PSNKCMAIHSPVMSSLNTSVVFGFLNFILWAGNIWFVFKETGWHSSGQRYLSDPMEKH SSSYNQGGYNQDSYGSSSGYSQQASLGPTSDEFGQQPTGPTSFTNQI" BASE COUNT 678 a 429 c 465 g 798 t ORIGIN 1 gcttcataaa aagagggaca agtggctggt gctgtggaca gagaagcttt atttttagta 61 tgagacaacc tctattttct ttcaggagag ggaagttgga ttatcaattc ttttgtaaat 121 gtgtatggtg atatttgctc cgctttttgc aatctttgca tttgcaacat gcggtggcta 181 ttctggaggc ctgcggctga gtgtggactg cgtcaacaag acagaaagta acctcagcat 241 cgacatagcg tttgcctacc cattcaggtt gcaccaggtg acgtttgagg tgcccacctg 301 cgagggaaag gaacggcaga agctggcatt gattggtgac tcctcgtctt cagcagagtt 361 cttcgtcact gttgctgtct tcgccttcct ctactctttg gctgccactg tcgtttacat 421 tttcttccag aacaaatacc gggaaaacaa ccggggccca ctcattgact tcattgtcac 481 tgtagtcttt tcgttcttgt ggttggtggg ttcatcagct tgggcaaaag gactgtctga 541 cgtcaaagtt gcaacggatc ccaaggaagt attgctacta atgtcagctt gcaaacagcc 601 atccaacaaa tgcatggcta tccacagccc tgttatgtca agcttaaaca cttctgtggt 661 ctttggattc ttgaacttta ttctctgggc tggaaacata tggtttgttt tcaaggagac 721 cggctggcat tcttcgggac agagatatct ttcagatcca atggagaagc actccagcag 781 ctataatcaa ggtggttaca accaagacag ctatggatca agcagtgggt acagtcagca 841 ggcgagtttg gggccaacct cagatgagtt tggccaacag cctactggcc ccacttcctt 901 taccaatcag atttaacaga gtagcatttg cattcttctg cagtcgcctc accatcttcc 961 atttcagtgg cagaagaatt ttttaagggt ttcaatcaat tattaatgca gagagtattg 1021 aatgtaaatc agagctctct agtcttcatt aaggcagcaa gtcctgggtt gtgaaaaatg 1081 atacttagag atgaggcgac atgaggagat atattattca tcatagatgg ctaattggag 1141 agtaccttgt tatatataca gatactttca tggtcatttt gtatgtatgt taaagtagta 1201 gaagtatttt gtagcttaaa gtctctagta tgtaatatgc ataaagtaaa tcaaatagcg 1261 ttgagttttc ttatgcattt tgatgtgaaa gatgttataa taatttctag aagacaattt 1321 ggtgtatcac aacatgcatg tcttattttt ttttagtttt aagtcctata ggactatgag 1381 tctctaagtt atttgtttca gaaaattatt ctttttttat gtgataaatc atatgattta 1441 agtgcatgaa taagcatttt ccaacacaat gaacatttga actgtgttta tgaaaatttt 1501 ctggtttgca ccatgaattt gtcaaatgga tatttatagg aatatattca ctactttgta 1561 tactttgcaa atttgtctct ctggctttac ccaagttctg aatgcattgt aattaaaatt 1621 taagtttttc ttttccccca ttagtaaaca tttagtgcta catatgataa ctgcccaata 1681 tttattctat ttacttagct aaatatttgc attcttgtaa ccttctatgg tgttttgtgg 1741 ctcttatctt gtggaccata aataacacgg cccaataact ctttgtgttt atggagtgtt 1801 gttttcttag aataatggag atgcagatat agataccata gtcaaggtac cgccttgctg 1861 aagtatttat ttataaagaa tattctgtag aacctctact accagctata tttttaaatc 1921 ctgtttattt gtaaagctaa tatgctcctc aatgtaatta ttaaaaattc tcaagtcaca 1981 gctaaactta ctaattctga ttttagtgta gcccctaaat taaaaatggc ttccatatgc 2041 cactctgtac cccaaagaga gttctcatga aatattctcc agaatgtatt cattatcaag 2101 aaaatgtcaa tcgtcacttc ctcgttttaa ctcagctgaa acaccaggac ccaatagaga 2161 gggcaagctg agcatctgta tttccagata aaagttgtta ttgatgtata aactcgttgc 2221 gtgattagtg atgttggaag cattttagca caaaacagcc ttgtgtctta gatgatatct 2281 gtaaccagtt tctgaatccc gttggataaa actgtattgt gatatctatt tgatgttaat 2341 aaagttattg catacaaaaa aaaaaaaaaa //