LOCUS BC021855 2469 bp mRNA linear HUM 28-SEP-2006
DEFINITION Homo sapiens zinc finger and BTB domain containing 47, mRNA (cDNA
clone MGC:29994 IMAGE:4943271), complete cds.
ACCESSION BC021855
VERSION BC021855.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2469)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2469)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38569485.
FEATURES Location/Qualifiers
source 1..2469
/db_xref="H-InvDB:HIT000039292"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29994 IMAGE:4943271"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2469
/gene="ZBTB47"
/gene_synonym="DKFZp434N0615"
/gene_synonym="KIAA1190"
/db_xref="GeneID:92999"
/db_xref="HGNC:HGNC:26955"
CDS 68..1183
/gene="ZBTB47"
/gene_synonym="DKFZp434N0615"
/gene_synonym="KIAA1190"
/codon_start=1
/product="zinc finger and BTB domain containing 47"
/protein_id="AAH21855.1"
/db_xref="GeneID:92999"
/db_xref="HGNC:HGNC:26955"
/translation="MATRSRENARRRGTPEPEEAGRRGGKRPKPPPGVASASARGPPA
TDGLGAKVKLEEKQHHPCQKCPRVFNNRWYLEKHMNVTHSRMQICDQCGKRFLLESEL
LLHRQTDCERNIQCVTCGKAFKKLWSLHEHNKIVHGYAEKKFSCEICEKKFYTMAHVR
KHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCNERFQYKYQLRSH
MSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPYICEICGKSFTSRPNMKRHRR
THTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVSHTLAGDGVPAAPGLPPTQPQAHAL
PLLPGLPQTLPPPPHLPPPPPLFPTTASPGGRMNANN"
BASE COUNT 529 a 775 c 749 g 416 t
ORIGIN
1 ggctgggggc aagcaggggc cacggggaag ccgaagcagc cgggcagacc cccctcccca
61 cagtcacatg gccacacggt cccgggagaa cgcccggcgc cggggtaccc ctgaacctga
121 agaagctggg cggcggggtg ggaagaggcc aaagccaccc cctggagtgg cctctgcatc
181 ggcccgaggg ccgccagcca ctgatgggct gggggccaag gtgaagctgg aggagaagca
241 gcaccatcca tgccagaagt gcccacgagt tttcaacaac cgctggtacc tggagaaaca
301 catgaatgtg acccacagcc gcatgcagat ctgcgaccag tgcggcaagc gcttcctgct
361 ggagagcgag ctgctgctgc acaggcagac agactgcgag cgcaacatcc agtgtgtgac
421 atgtggcaaa gctttcaaga agctttggtc cctccatgag cataacaaga ttgtgcacgg
481 ctacgcagag aagaagttct catgcgagat ctgtgagaag aagttctaca ccatggccca
541 cgtgcgtaag cacatggttg cccacaccaa ggacatgccc ttcacctgcg agacctgcgg
601 aaagtccttc aagcgcagca tgtccctcaa ggtgcactca ctgcagcact caggggagaa
661 gccgttcaga tgtgagaact gcaatgagcg cttccagtac aagtaccagc tgcggtcaca
721 catgagcatc cacattggcc acaagcagtt catgtgccaa tggtgcggca aggacttcaa
781 catgaagcag tacttcgatg agcacatgaa gacccacaca ggagagaagc cgtacatctg
841 cgagatctgt ggcaagagct tcaccagccg gcccaacatg aagcggcacc ggcgcacgca
901 cacgggcgag aagccgtacc cgtgcgacgt gtgtggccag cgcttccgct tctccaacat
961 gctcaaggcc cacaaggaga agtgcttccg cgtcagccac accctggccg gcgacggcgt
1021 ccccgctgcc ccaggcctgc ccccaaccca gccccaggcg cacgcactgc ccctgctccc
1081 ggggctgccc cagaccctgc cgcccccgcc ccacctgccg cccccgcctc cgctcttccc
1141 caccactgcc agccccggcg ggaggatgaa cgccaacaac tagctgccga gctgcacccg
1201 tgcacccgct ggggcctgga gtcagggccc actccaggag ggacccactg ccttcccggg
1261 gagcacagta gtgcgggcct gggccctgct ccacctccag aagtggctgg atgtaccctg
1321 cctgaggccc cgacgaggag gggtatgcag gctggcaggc cccagagctg gtggagggca
1381 tctcactccc aagtgccccc cctttctgtg actccttgaa gcctttactt tttttttttt
1441 tggaagtgaa ggaaaaagaa actatttaca gcactcccct ccaggtgagg ggggtgctgg
1501 gggtctgcag cagaaagaaa ggggcctggg cagcaggtgt ggccagtccc tctgccaagg
1561 cctgtgccag aggggttggc cagttggagc ctgggtcagc ctcagcagcc tatccccatg
1621 tcctctatgc ccctaatttg cttcctcatc ttggagggtt tggggagaag ttggcgtgcc
1681 acccccacaa cccctgagga ggtgtagacc cagtctgaga gccgcaagca ctgaggcagg
1741 gcctgagact ggacctgggt gagcgtgggg ggtggagggt ggcgaggtgc ggagactgca
1801 gaccagtgct tcactgtgtg gagtggggca ggcaggggct ggaccccagg gacttgcctt
1861 ccccacccac tctgctgcca gcaggcccag ggatccctga cctgcaccag gtggcaccaa
1921 gggtcctgag tcctggagat gtccccagaa gctgctgtgc ctcacagcgc tgtgagccag
1981 accctccttg ggcagacagg ctgactggca gcaccagctt tgggggcaga gtcctaggat
2041 gaggcttggg cagtgctggt agggtttcaa ggtgctatta gtggggcagg ggcagggcgg
2101 ctgctcacag agcaccccag ttcctcacca gctactctgg ccatatatcc cacaccagaa
2161 ggaacaagtg tggctgtgtc catctctgct cccccaaagg cccgctctag gccttatcct
2221 ccctctaggt cctgccacaa cctgtccctg gctggctcca gcgtcctcgt ccctcctggg
2281 cctgtgcacc ggtgggtggg gcgcccatag cactgccggt aaaggagcct gcatgttcag
2341 gcccctcggg ggattggggg gactggggag gcacagccta gacccaattg cttgccccca
2401 tgaggctagc actaatagga aacccttttt tgttgtcaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaa
//