LOCUS BC020773 986 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens exosome component 8, mRNA (cDNA clone MGC:22685
IMAGE:4808747), complete cds.
ACCESSION BC020773
VERSION BC020773.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 986)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 986)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31415881.
FEATURES Location/Qualifiers
source 1..986
/db_xref="H-InvDB:HIT000038951"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22685 IMAGE:4808747"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..986
/gene="EXOSC8"
/gene_synonym="bA421P11.3"
/gene_synonym="CIP3"
/gene_synonym="EAP2"
/gene_synonym="OIP2"
/gene_synonym="p9"
/gene_synonym="RP11-421P11.3"
/gene_synonym="RRP43"
/gene_synonym="Rrp43p"
/db_xref="GeneID:11340"
/db_xref="HGNC:HGNC:17035"
/db_xref="MIM:606019"
CDS 27..857
/gene="EXOSC8"
/gene_synonym="bA421P11.3"
/gene_synonym="CIP3"
/gene_synonym="EAP2"
/gene_synonym="OIP2"
/gene_synonym="p9"
/gene_synonym="RP11-421P11.3"
/gene_synonym="RRP43"
/gene_synonym="Rrp43p"
/codon_start=1
/product="exosome component 8"
/protein_id="AAH20773.1"
/db_xref="GeneID:11340"
/db_xref="HGNC:HGNC:17035"
/db_xref="MIM:606019"
/translation="MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSIST
ADGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEA
QVASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILDACTFALLAAL
KNVQLPEVTINEETALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLA
TGTLTIVMDEEGKLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDEVIKSMKPK
"
BASE COUNT 335 a 181 c 215 g 255 t
ORIGIN
1 gcaggcgcag acgcgcgggc gggaagatgg cggctgggtt caaaaccgtg gaacctctgg
61 agtattacag gagatttctg aaagagaact gccgtcctga tggaagagaa cttggtgaat
121 tcagaaccac aactgtcaac atcggttcaa ttagtaccgc agatggttct gctttagtga
181 agttgggaaa tactacagta atctgtggag ttaaagcaga atttgcagca ccatcaacag
241 atgcccctga taaaggatac gttgttccta atgtggatct accacccctg tgttcatcga
301 gattccggtc tggacctcct ggagaagagg cccaagtggc tagccaattc attgcagatg
361 tcattgaaaa ttcacagata attcagaaag aggacttatg catttctcca ggaaagcttg
421 tctgggttct atactgtgat ctcatttgcc tcgactacga tggaaacatt ttggatgcct
481 gcacatttgc tttgctagcg gctttaaaaa atgtacagtt gcctgaagtt actataaatg
541 aagaaactgc tttagcagaa gttaatttaa agaagaaaag ttatttgaat attagaactc
601 atccagttgc aacttccttt gctgtgtttg atgacacttt gcttatagtt gaccctactg
661 gagaggagga acatctggca acaggaacct taacaatagt aatggatgag gaaggcaaac
721 tctgttgtct tcacaaacca ggtggaagtg ggctaactgg agctaaactt caggactgta
781 tgagccgagc agttacaaga cacaaagaag ttaaaaaact gatggatgaa gtaattaaga
841 gtatgaaacc caaataaaca gccaccacat tttcaaaaca gatttgtaaa aattgtattt
901 gttaacactg tgcacaaacg ttttatacta aataaatatc aaactacatt cttccgaaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaa
//