LOCUS BC020082 2650 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens suppressor of cytokine signaling 6, mRNA (cDNA clone MGC:9529 IMAGE:3917519), complete cds. ACCESSION BC020082 VERSION BC020082.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2650) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2650) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: a Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21450784. FEATURES Location/Qualifiers source 1..2650 /db_xref="H-InvDB:HIT000038731" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9529 IMAGE:3917519" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2650 /gene="SOCS6" /gene_synonym="CIS4" /gene_synonym="HSPC060" /gene_synonym="SSI4" /gene_synonym="STAI4" /gene_synonym="STATI4" /db_xref="GeneID:9306" /db_xref="HGNC:HGNC:16833" /db_xref="MIM:605118" CDS 191..1798 /gene="SOCS6" /gene_synonym="CIS4" /gene_synonym="HSPC060" /gene_synonym="SSI4" /gene_synonym="STAI4" /gene_synonym="STATI4" /codon_start=1 /product="suppressor of cytokine signaling 6" /protein_id="AAH20082.1" /db_xref="GeneID:9306" /db_xref="HGNC:HGNC:16833" /db_xref="MIM:605118" /translation="MKKISLKTLRKSFNLNKSKEETDFMVVQQPSLASDFGKDDSLFG SCYGKDMASCDINGEDEKGGKNRSKSESLMGTLKRRLSAKQKSKGKAGTPSGSSADED TFSSSSAPIVFKDVRAQRPIRSTSLRSHHYSPAPWPLRPTNSEETCIKMEVRVKALVH SSSPSPALNGVRKDFHDLQSETTCQEQANSLKSSASHNGDLHLHLDEHVPVVIGLMPQ DYIQYTVPLDEGMYPLEGSRSYCLDSSSPMEVSAVPPQVGGRAFPEDESQVDQDLVVA PEIFVDQSVNGLLIGTTGVMLQSPRAGHDDVPPLSPLLPPMQNNQIQRNFSGLTGTEA HVAESMRCHLNFDPNSAPGVARVYDSVQSSGPMVVTSLTEELKKLAKQGWYWGPITRW EAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEG HTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVI RQYTRIDLIQKLPLPNKMKDYLQEKHY" BASE COUNT 773 a 549 c 605 g 723 t ORIGIN 1 ggagaaggcg agcgcggcag tcgcgccggc gctgggcgag gaagcggagc cgggccgcct 61 ccggaaaatg gctccaaagg ttaaatgaag caggaaaaat acatagatgc agccttgcag 121 cctctccaga tgtttgggga taatattcca gatagaaata ttgatccctt ggattaggta 181 actagtcata atgaagaaaa ttagtcttaa aaccttacgg aaatctttta acttgaataa 241 aagtaaagaa gaaactgatt tcatggtagt acaacaacca tcgctagcca gtgactttgg 301 aaaagatgat tccttatttg gtagctgcta tggtaaagat atggccagct gcgatatcaa 361 cggtgaagat gaaaaaggcg gaaaaaacag atcaaaaagc gagagcctga tgggtacgct 421 aaaaaggcgg ctttctgcaa aacagaagtc aaaaggcaag gcgggcacac cctctgggag 481 ctctgccgac gaggacacct tctcctcctc ctcagcaccc atagtcttta aagacgtgag 541 agctcagagg ccgataaggt ccacgtcgct ccgcagccat cactacagtc ccgcgccgtg 601 gcctctgcgg cccacaaact ccgaggagac ctgcatcaag atggaggtga gagtcaaggc 661 cttggttcac tcttccagcc cgagtccagc cctgaatggc gtccggaagg atttccacga 721 cctccagtct gagaccacgt gccaggagca agccaattca ctgaagagct cggcttctca 781 taatggagac ctgcatcttc acctggatga acatgtgcct gtcgttattg gacttatgcc 841 tcaggactac attcagtata ctgtgccttt agatgagggg atgtatcctt tggaaggatc 901 acggagctat tgtctggaca gctcttctcc catggaagtc tctgcggttc ctcctcaagt 961 gggagggcgc gctttccccg aggatgagag tcaggtagac caggacctag ttgtcgcccc 1021 agagatcttc gtggatcagt ccgtgaatgg cttgttgatt ggcaccacgg gagtcatgtt 1081 gcagagcccg agagcgggtc acgatgatgt ccctccactc tcaccattgc tacctccaat 1141 gcagaataat caaatccaaa ggaacttcag tggactcact ggcacagaag cccacgtggc 1201 tgaaagtatg cgctgtcatt tgaattttga tccgaactct gctcctgggg ttgcaagagt 1261 ttatgactca gtgcaaagta gtggtcccat ggttgtgaca agccttacag aggagctgaa 1321 aaaacttgca aagcaaggat ggtactgggg accaatcaca cgttgggagg cagaagggaa 1381 gctagcaaac gtgccagatg gttcttttct tgttcgggac agttctgacg accgttacct 1441 tttaagcttg agctttcgct cccatggtaa aacacttcac actagaattg agcactcaaa 1501 tggtaggttt agcttttatg aacagccaga tgtggaagga catacgtcca tagttgatct 1561 aattgagcat tcaatcaggg actctgaaaa tggagctttt tgttattcaa ggtctcggct 1621 gcctggatct gcaacttacc ccgtcagact gaccaaccca gtgtcccggt tcatgcaggt 1681 gcgctcgttg cagtacctgt gtcgttttgt tatacgtcag tataccagaa tagacttaat 1741 tcagaaactg cctttgccaa acaaaatgaa ggattattta caggagaagc actactgaaa 1801 gattgagaac cctgcatctt gcactttggg aataagaaca agagattgaa atacagttta 1861 caaactttca ttgccatcaa aatcttttgc tgccataact atttcagttt tatgtgtaaa 1921 agagtcatca gtttgtttag gggtggggaa gtgtcagcaa ggtgtcttgg gtttattttg 1981 gttctttaaa aaagggaagt cttgaggttt tagaggtgtg aattatgttt catcaatgtg 2041 cagaataatc acaatgtgaa ttatcaaatt ctcctcaatg ccccccccgc ccagtccttt 2101 gctgctatcc actgtgattt ttatgcatta aaagcacatt tcatgtgtat tcaaccctaa 2161 gtaaagttga atgaaactta acagaatgga aattgctatg tctttttaaa tggtccattt 2221 tcaaaagaca gtgttgaata aacatacctg tgtgataaaa cacagaattt acatatacac 2281 tgaagatgag tttttaatct cttactttaa aaagatttat ttagaatcgt gaattgacat 2341 aatcttgggt aatggaacgg agatctgcaa catatctttt aacaacactt ttttctaaat 2401 tatttctaag gttgtgctaa ttcttttggt tgtgaaaagt tgaatttttc tgttgccttc 2461 gttttcatct tctagtttgt ctattttaat aaatggcctt acattaaaaa attgtaaaga 2521 aatgtatacc accaatttag aaattgttgc cttttctgta attaaactcg ggtacaaatt 2581 ggcataacat gaaaacctat ggaactagaa ttattattaa agaaatatta gatgaaaaaa 2641 aaaaaaaaaa //