LOCUS BC020062 3486 bp mRNA linear HUM 25-JAN-2007 DEFINITION Homo sapiens gem (nuclear organelle) associated protein 4, mRNA (cDNA clone MGC:16993 IMAGE:4340940), complete cds. ACCESSION BC020062 VERSION BC020062.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3486) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3486) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: i Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7657121. FEATURES Location/Qualifiers source 1..3486 /db_xref="H-InvDB:HIT000038727" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16993 IMAGE:4340940" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3486 /gene="GEMIN4" /gene_synonym="DKFZP434B131" /gene_synonym="DKFZP434D174" /gene_synonym="HC56" /gene_synonym="HCAP1" /gene_synonym="HHRF-1" /gene_synonym="p97" /db_xref="GeneID:50628" /db_xref="HGNC:HGNC:15717" /db_xref="MIM:606969" CDS 50..3226 /gene="GEMIN4" /gene_synonym="DKFZP434B131" /gene_synonym="DKFZP434D174" /gene_synonym="HC56" /gene_synonym="HCAP1" /gene_synonym="HHRF-1" /gene_synonym="p97" /codon_start=1 /product="gem (nuclear organelle) associated protein 4" /protein_id="AAH20062.1" /db_xref="GeneID:50628" /db_xref="HGNC:HGNC:15717" /db_xref="MIM:606969" /translation="MDLGPLNICEEMTILHGGFLLAEQLFHPKALAELTKSDWERVGR PIVEALREISSAAAHSQPFAWKKKALIIIWAKVLQPHPVTPSDTETRWQEDLFFSVGN MIPTINHTILFELLKSLEASGLFIQLLMALPTTICHAELERFLEHVTVDTSAEDVAFF LDVWWEVMKHKGHPQDPLLSQFSAMAHKYLPALDEFPHPPKRLRSDPDACPTMPLLAM LLRGLTQIQSRILGPGRKCCALANLADMLTVFALTEDDPQEVSATVYLDKLATVISVW NSDTQNPYHQQALAEKVKEAERDVSLTSLAKLPSETIFVGCEFLHHLLREWGEELQAV LRSSQGTSYDSYRLCDSLTSFSQNATLYLNRTSLSKEDRQVVSELAECVRDFLRKTST VLKNRALEDITASIAMAVIQQKMDRHMEVCYIFASEKKWAFSDEWVACLGSNRALFRE PDLVLRLLETVIDVSTADRAIPESQIRQVIHLILECYADLSLPGKNKVLAGILRSWGR KGLSEKLLAYVEGFQEDLNTTFNQLTQSASEQGLAKAVASVARLVIVHPEVTVKKMCS LAVVNLGTHKFLGQILTAFPALRFVEEQGPNSSATFMVSCLKETVWMKFSTPKEEKQF LELLNCLMSPVKPQGIPVAALLEPDEVLKEFVLPFLRLDVEEVDLSLRIFIQTLEANA CREEYWLQTCSPFPLLFSLCQLLDRFSKYWQLPKEKRCLSLDRKDLAIHILELLCEIV SANAETFSPDVWIKSLSWLHRKLEQLDWTVGLRLKSFFEGHFKCEVPATLFEICKLSE DEWTSQAHPGYGAGTGLLAWMECCCVSSGISERMLSLLVVDVGNPEEVRLFSKGFLVA LVQVMPWCSPQEWQRLHQLTRRLLEKQLLHVPYSLEYIQFVPLLNLKPFAQELQLSVL FLRTFQFLCSHSCRNWLPLEGWNHVVKLLCGSLTRLLDSVRAIQAAGPWVQGPEQDLT QEALFVYTQVFCHALHIMAMLHPEVCEPLYVLSIETLTCYETLSKTNPSVSSLRSRAH EQRFLKSIAEGIGPEERRQTLLQKMSSF" BASE COUNT 768 a 980 c 968 g 770 t ORIGIN 1 ctcggagggg agggggcgtt agccccgcgc agccgccggc gtcgccgcca tggacctagg 61 acccttgaac atctgtgaag aaatgactat tctgcatgga ggcttcttgc tggccgagca 121 gctgttccac cctaaggcac tggcagaatt aacaaagtct gactgggaac gtgttggacg 181 gcccatcgtg gaggccttaa gggagatctc ctcggctgca gcacactccc agccctttgc 241 ctggaagaag aaagccctga tcatcatctg ggccaaggtt ctgcagccgc accccgtgac 301 cccgtccgac acagagacac ggtggcagga agacctgttc ttctcggtgg gcaacatgat 361 ccccaccatc aaccacacca tcctcttcga gctgctcaaa tccctggaag cttctggact 421 ctttatccag ctcctgatgg ccctgcccac caccatctgc catgcagaac tagagcgctt 481 tctggaacat gtgaccgttg acacttctgc cgaagacgtg gccttcttcc tggacgtctg 541 gtgggaggtg atgaagcaca agggtcaccc gcaggacccc ctgctctccc agtttagtgc 601 aatggcccat aagtacctgc ctgccttaga tgagttcccc catcctccaa agaggcttag 661 gtcagaccca gacgcgtgcc ccaccatgcc cctgttggcc atgctgctcc gcgggctgac 721 acagatccag agtcggatcc tgggcccggg gaggaagtgc tgtgcgctgg ccaacctggc 781 tgacatgctg actgtgtttg cgctgacaga ggacgacccc caggaggtgt ctgcaaccgt 841 gtatctggac aaactggcca cggtgatctc tgtgtggaac tcggacaccc agaatcccta 901 ccaccagcag gcgctggcag agaaggtgaa ggaggcagaa cgggatgtca gcctgacctc 961 gctggccaaa ctccccagtg agaccatttt cgtgggctgc gagttcctgc accacctgct 1021 gcgggagtgg ggggaggagt tgcaggccgt gctccgcagc agccagggga caagttacga 1081 cagctaccgg ctgtgcgaca gtctgacttc cttcagccag aacgcgacgc tctacctgaa 1141 ccgcaccagc ctgtccaagg aggacaggca ggtggtctct gagctggcgg agtgtgtcag 1201 ggacttcctg aggaaaacga gcacggtgct gaagaacagg gccttggagg atatcacagc 1261 ttccattgcc atggccgtca tccagcagaa gatggaccgc catatggaag tgtgctacat 1321 ttttgcctct gagaagaagt gggccttctc ggacgagtgg gtagcctgcc tggggagtaa 1381 cagggccctc ttccgagagc cagacttggt gttgaggctg ctggaaacag tgatagacgt 1441 cagcacagct gacagagcca tccctgagtc tcagatccgg caggtgatcc acctgatcct 1501 ggaatgttac gcagacctct ccctgccagg taaaaataaa gtccttgcag gtatcctgcg 1561 ttcctggggg cgaaagggcc tctctgaaaa gttgctggct tatgtggagg gttttcagga 1621 agacctcaat acaactttta accagctcac tcagagtgcc tccgaacagg gcttggcaaa 1681 agctgtggcc tccgtggccc gcctggtcat agtgcacccg gaagtcacgg tgaagaaaat 1741 gtgcagcctg gctgtggtca atctcggcac ccacaagttc ctgggccaga ttctcactgc 1801 cttccctgcc cttaggtttg tggaagagca gggtcccaat tcatctgcca ctttcatggt 1861 gtcatgcctc aaagaaaccg tctggatgaa gttctctaca cccaaggaag aaaagcaatt 1921 tttagagctc ctgaactgcc tgatgagtcc cgtgaaaccc caagggattc cagtggctgc 1981 tcttcttgag ccagacgagg tgctgaagga atttgtcctg cctttcttga ggttagatgt 2041 tgaagaggta gacctcagtc tgaggatctt catccagact ctagaggcaa acgcgtgccg 2101 agaggaatac tggctccaga cctgctcccc gtttccactc ctcttcagct tgtgccagct 2161 cttggaccgc ttcagcaaat actggcagct tcccaaggag aagcggtgcc tctctttgga 2221 taggaaggat ctagcgatcc atatcctgga gctcctgtgt gagattgtat cagccaatgc 2281 tgagaccttc tccccggatg tctggatcaa gtccctgtcc tggctccacc gcaagttaga 2341 acagctagac tggactgtgg gcctgaggct gaagagcttc ttcgaggggc acttcaagtg 2401 tgaagtgcca gccacacttt ttgagatctg taagctttca gaagacgagt ggacctccca 2461 ggcccaccca gggtacgggg ctggcacggg gctcctggcc tggatggagt gctgctgcgt 2521 ctccagcggc atctcggaga ggatgctgtc tctcttggtg gtggacgtgg gcaatcctga 2581 ggaggtcaga ctgttcagca aaggctttct ggtggccctg gtgcaagtca tgccttggtg 2641 cagccctcag gagtggcagc gccttcacca gctgaccagg agactgctgg agaagcagct 2701 cctccatgtc ccttatagcc tggaatatat tcagtttgtt cccctgctca acctgaagcc 2761 ctttgcccag gagttgcaac tctccgtcct cttcctgagg actttccagt ttctctgcag 2821 ccatagctgt cgtaattggc ttcctctgga aggctggaac cacgtggtca aactcctctg 2881 tggcagtctg acccgcctcc tggactcagt cagggcgata caggcagctg gcccttgggt 2941 tcaaggacca gagcaggacc tgacccagga agccctgttt gtttacaccc aggtgttctg 3001 ccatgctctg cacatcatgg ccatgctcca cccggaggtc tgtgagccac tctacgtttt 3061 aagtattgaa accctcacct gctatgagac tttgagcaag accaaccctt ctgtcagctc 3121 cttgcgttca agggcacacg agcagcgctt cttaaagtcc attgctgagg gcatcggccc 3181 tgaagaacgg cgccaaaccc tgttgcagaa gatgagcagc ttctgacttg gcgtggggag 3241 ctgggcccca acatggcggg tctgcagaag atcagcagct tcttacctgt gcgggagcga 3301 aaaagctggg cttcaacatg gcaggtctgt aggggtcaga cccgagcagc ctggacttta 3361 cagttatgtg aaactgtcca caaaacttca tggcaataat ggtgtaaaga aaatagtttc 3421 ttgggtattt gtaacgtaca aactatcata aaaattctcc tctttcgcaa aaaaaaaaaa 3481 aaaaaa //