LOCUS BC018708 2150 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens zinc finger CCCH-type containing 10, mRNA (cDNA clone
MGC:31767 IMAGE:4111500), complete cds.
ACCESSION BC018708
VERSION BC018708.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2150)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2150)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: c Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14249451.
FEATURES Location/Qualifiers
source 1..2150
/db_xref="H-InvDB:HIT000038410"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31767 IMAGE:4111500"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2150
/gene="ZC3H10"
/gene_synonym="FLJ14451"
/db_xref="GeneID:84872"
/db_xref="HGNC:HGNC:25893"
CDS 178..1482
/gene="ZC3H10"
/gene_synonym="FLJ14451"
/codon_start=1
/product="zinc finger CCCH-type containing 10"
/protein_id="AAH18708.1"
/db_xref="GeneID:84872"
/db_xref="HGNC:HGNC:25893"
/translation="MPDRDSYANGTGSSGGGPGGGGSEEASGAGVGSGGASSDAICRD
FLRNVCKRGKRCRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECSRPNCRFIHGSKEDE
DGYKKTGELPPRLRQKVAAGLGLSPADLPNGKEEVPICRDFLKGDCQRGAKCKFRHLQ
RDFEFDARGGGGTGGGSTGSVLPGRRHDLYDIYDLPDRGFEDHEPGPKRRRGGCCPPD
GPHFESYEYSLAPPRGVECRLLEEENAMLRKRVEELKKQVSNLLATNEVLLEQNAQFR
NQAKVITLSSTAPATEQTLAPTVGTVATFNHGIAQTHTTLSSQALQPRPVSQQELVAP
AGAPAAPPTNAAPPAAPPPPPPHLTPEITPLSAALAQTIAQGMAPPPVSMAPVAVSVA
PVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRITAMPH"
BASE COUNT 535 a 579 c 611 g 425 t
ORIGIN
1 ggctctttgt cgaagctaga ggaccggcag gcggcagcag caactacggc ggcggcggca
61 gaacccagca gtgatgtgga ggtggagacc cacaggagcc ccggacttca cctgagctac
121 ctcagtggtc accaagagtg gcaagataaa gaaaaccctg agttgggcgg gaccaggatg
181 cctgaccggg acagctatgc caacggtacc gggagcagcg gtggaggccc tggaggtggt
241 ggcagcgagg aggccagtgg ggcaggggta ggcagtggcg gggccagctc agatgccatc
301 tgtagagact tcttgaggaa tgtgtgcaag cgaggcaagc gttgccgata tcgccaccca
361 gacatgagcg aggtgtccaa cttgggggtg agcaaaaacg agttcatctt ctgccatgac
421 ttccagaaca aggagtgtag ccgcccaaat tgccgtttca tccatggctc caaggaggat
481 gaggatggct ataagaagac aggagagctt cccccacggc tgaggcagaa agtagcagct
541 ggccttggcc tttcaccggc tgacctacca aatggcaagg aggaggtccc tatctgccgt
601 gactttctca agggtgactg tcagagagga gccaagtgca agttccgtca cctgcaacgg
661 gattttgagt ttgatgctcg gggtggagga ggcactggtg ggggctcaac aggctcagtc
721 ctcccaggac gacgtcatga tctctatgat atctatgacc ttcctgacag gggctttgag
781 gaccatgagc caggcccaaa acgccggcga ggtggatgct gcccccctga tggccctcat
841 tttgagtcat atgaatatag tttggctcca ccgcgagggg tggagtgcag actgctagag
901 gaggagaatg ccatgctcag gaagcgggta gaggagttaa agaagcaggt cagcaacctg
961 ctggccacca atgaggtact actggaacaa aatgctcagt tccgcaatca ggccaaggtc
1021 ataaccctga gctccactgc accagcgact gagcagactc tggcccccac tgtgggcact
1081 gttgccactt ttaaccatgg cattgcccag actcacacta ctctcagcag ccaggctcta
1141 cagcctcgtc cagtgtccca gcaagaactg gtggcccctg ctggagctcc agctgctccc
1201 ccaactaatg ctgcacctcc tgctgctcca ccacccccac ccccacactt gaccccagag
1261 atcacgccac tgtcagctgc cctggctcaa acaattgccc agggaatggc acctccacct
1321 gtctccatgg ctcctgtggc tgtatctgtg gctcctgtgg cccctgtggc tgtatcgatg
1381 gcccaaccct tggcaggaat cacaatgagc cacaccacca ctcccatggt gacttaccct
1441 atcgcttccc agagcatgcg catcacggcc atgccacact gatggggcta atggacactc
1501 ccctggtata gcctcgcagg gctggggtca gggggccctt gcccactcac ctagccttcc
1561 ccatccctgt ctgaagggct cccttgagaa ctaggacaag agactacaag gagtatgtcc
1621 tgaggagggg ttgggatggt gtgttttctc tcacctccct tttatgaggg tcctcttgtc
1681 catcttcaag cctcacagtg ggggcttgca gaggagtgca gactgaagcc agcagagagg
1741 aaggactgac tgaggggctg tgtcctctta tgggaatttg ggaacatccc tcgtcttgtc
1801 ctctcttctg cacagcacag gttccagcac tggttttaga agaaaaaaat accctgccca
1861 gagggaaagc caggaaagat tgggaagtgg gtggtcagga gagaaggcct gataggagcc
1921 ttcagacaat ttgggtccta gttgcttggg ttggacaata caggaattgc ttctgggccc
1981 tgggaaagct gggaccatag tgctccagcc caaagactag gggagcattc attaccctag
2041 tttgacctga aaatccatag ggcagggccc actactttcc aaagaaataa aagaacaatt
2101 atttttaaca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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