LOCUS BC018488 579 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens RAB interacting factor, mRNA (cDNA clone MGC:21266 IMAGE:4475846), complete cds. ACCESSION BC018488 VERSION BC018488.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 579) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 579) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 28 Row: d Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31543539. FEATURES Location/Qualifiers source 1..579 /db_xref="H-InvDB:HIT000038352" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21266 IMAGE:4475846" /tissue_type="Prostate, adenocarcinoma." /clone_lib="NIH_MGC_91" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..579 /gene="RABIF" /gene_synonym="MSS4" /gene_synonym="RASGFR3" /db_xref="GeneID:5877" /db_xref="HGNC:HGNC:9797" /db_xref="MIM:603417" CDS 13..384 /gene="RABIF" /gene_synonym="MSS4" /gene_synonym="RASGFR3" /codon_start=1 /product="RAB interacting factor" /protein_id="AAH18488.1" /db_xref="GeneID:5877" /db_xref="HGNC:HGNC:9797" /db_xref="MIM:603417" /translation="MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLF LPSMRKKPALSDGSNPDGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPI GWHCLDDKNSFYVALERVSHE" BASE COUNT 173 a 138 c 145 g 123 t ORIGIN 1 gcggcagcgg cgatggaacc agcggagcag ccgagcgagt tagtgtcagc cgagggccga 61 aaccggaagg cggtgctgtg ccagcgttgc ggctcccggg tgctgcagcc agggaccgct 121 ctcttctctc gccgacagct tttccttccc tccatgagaa agaagccagc tctgtctgac 181 ggcagcaatc ctgacggcga tctcctccag gaacactggc tggttgagga catgttcatt 241 tttgagaatg tgggcttcac caaggacgtg ggcaacatca agtttctggt ctgcgcagac 301 tgtgaaattg gaccaattgg ctggcattgc ctagatgaca agaacagttt ctatgtggcc 361 ttggaacgag tttcccatga gtaactgagg ggaggggtac tcagccccat ctccaaagat 421 aaacctactc cccacaagaa ctggccttta atgtggtata actgttccgc tgccttcttg 481 tctgtgctaa tataaatact gagtaccagc atgtccattt gctaaaaaaa aaaaaaaaaa 541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //