LOCUS BC017959 1214 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens chromosome 2 open reading frame 47, mRNA (cDNA clone
MGC:24081 IMAGE:4607945), complete cds.
ACCESSION BC017959
VERSION BC017959.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1214)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: f Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13375659.
FEATURES Location/Qualifiers
source 1..1214
/db_xref="H-InvDB:HIT000038210"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24081 IMAGE:4607945"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1214
/gene="C2orf47"
/gene_synonym="FLJ22555"
/db_xref="GeneID:79568"
/db_xref="HGNC:HGNC:26198"
CDS 7..882
/gene="C2orf47"
/gene_synonym="FLJ22555"
/codon_start=1
/product="chromosome 2 open reading frame 47"
/protein_id="AAH17959.1"
/db_xref="GeneID:79568"
/db_xref="HGNC:HGNC:26198"
/translation="MALAARLLPQFLHSRSLPCGAVRLRTPAVAEVRLPSATLCYFCR
CRLGLGAALFPRSARALAASALPAQGSRWPVLSSPGLPAAFASFPACPQRSYSTEEKP
QQHQKTKMIVLGFSNPINWVRTRIKAFLIWAYFDKEFSITEFSEGAKQAFAHVSKLLS
QCKFDLLEELVAKEVLHALKEKVTSLPDNHKNALAANIDEIVFTSTGDISIYYDEKGR
KFVNILMCFWYLTSANIPSETLRGASVFQVKLGNQNVETKQLLSASYEFQREFTQGVK
PDWTIARIEHSKLLE"
BASE COUNT 357 a 274 c 264 g 319 t
ORIGIN
1 ataaaaatgg cgctggccgc tcgtttgcta ccccagttcc tgcactctcg gtcgctgccc
61 tgcggggccg tccgactccg gactcctgct gtggccgagg tgaggctgcc gtcggccaca
121 ctttgctact tctgccgctg tcgcctcggc ttgggagcgg cgttatttcc acgaagcgct
181 agggccttgg cagcctcggc gctacctgcc cagggctccc ggtggccagt gctcagcagc
241 ccgggactcc ccgcagcctt cgcttctttc cctgcctgcc ctcagcgcag ctacagcacg
301 gaggagaagc cccagcagca ccagaaaacc aagatgatcg tcctgggatt ctccaacccc
361 atcaactggg ttaggactcg aattaaggcc ttccttatct gggcctattt cgacaaagag
421 ttcagcatca cagagttctc cgagggagcg aagcaggctt ttgctcatgt atccaagttg
481 ctgtcacagt gtaaatttga tctgttggaa gaacttgtgg ccaaagaggt gctacatgca
541 ttgaaagaaa aggttacttc actacctgac aaccataaaa atgcccttgc tgctaacata
601 gatgaaattg tatttacatc aacaggagac atctccattt actatgatga gaaaggaagg
661 aagtttgtta acatcctgat gtgcttttgg tatctaacca gtgccaacat ccccagtgaa
721 actttaagag gagccagtgt attccaggtt aagttgggga atcagaatgt ggaaactaaa
781 caacttctta gtgcaagcta tgagtttcag agggagttca cacaaggagt aaagcctgac
841 tggaccattg cacggattga acactcaaaa ttattagaat aattttcttg gaaaaatcag
901 cttatggact ttagcagttg ctgtgaaaaa ctaaggaaga aaaattttgg ggtcatttga
961 tcttcactta atctaagtct gtgaattact tttatattat tttgaaatac tccttgcagt
1021 atattggcat gatacagtaa aagcattttc cacagattgt tatcaccttc tttaaaagaa
1081 gtcaaaattt aaaaaataca atagcacgtt gttggtgtca tattcaataa catttccaat
1141 gctacatata attttataga cataataaag aaggtattga aaaaacctaa aaaaaaaaaa
1201 aaaaaaaaaa aaaa
//