LOCUS BC017711 2151 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
B, mRNA (cDNA clone MGC:21236 IMAGE:4430974), complete cds.
ACCESSION BC017711
VERSION BC017711.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2151)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2151)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22538447.
FEATURES Location/Qualifiers
source 1..2151
/db_xref="H-InvDB:HIT000038095"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21236 IMAGE:4430974"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2151
/gene="PIGB"
/gene_synonym="MGC21236"
/db_xref="GeneID:9488"
/db_xref="HGNC:HGNC:8959"
/db_xref="MIM:604122"
CDS 254..1918
/gene="PIGB"
/gene_synonym="MGC21236"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class B"
/protein_id="AAH17711.1"
/db_xref="GeneID:9488"
/db_xref="HGNC:HGNC:8959"
/db_xref="MIM:604122"
/translation="MRRPLSKCGMEPGGGDASLTLHGLQNRSHGKIKLRKRKSTLYFN
TQEKSARRRGDLLGENIYLLLFTLALRILNCFLVQTSFVPDEYWQSLEVSHHMVFNYG
YLTWEWTERLRSYTYPLIFASIYKILHLLGKDSVQLLIWIPRLAQALLSAVADVRLYS
LMKQLENQEVARWVFFCQLCSWFTWYCCTRTLTNTMETVLTIIALFYYPLEGSKSMNS
VKYSSLVALAFIIRPTAVILWTPLLFRHFCQEPRKLDLILHHFLPVGFVTLSLSLMID
RIFFGQWTLVQFNFLKFNVLQNLGTFYGSHPWHWYFSQGFPVILGTHLPFFIHGCYLA
PKRYRILLVTVLWTLLVYSMLSHKEFRFIYPVLPFCMVFCGYSLTHLKTWKKPALSFL
FLSNLFLALYTGLVHQRGTLDVMSHIQKVCYNNPNKSSASIFIMMPCHSTPYYSHVHC
PLPMRFLQCPPDLTGKSHYLDEADVFYLNPLNWSHREFHDDASLPTHLITFSILEEEI
SAFLISSNYKRTAVFFHTHLPEGRIGSHIYVYERKLKGKFNMKMKF"
BASE COUNT 598 a 460 c 441 g 652 t
ORIGIN
1 gggccttcca gcagttttcg gacccccgag cacagagacc gccaagccaa aggcgagtag
61 caatccctcg gttcggaaac ggcgaaagga aaccgcaagg aggccaccac gtcgggtggg
121 agctacgaag ttgcccgttc ccggttactt ccgggcttgc gagcgacgac tgctctcaaa
181 ggccaaactt aatggatgga cgagcagcgc gctactgcag ctttcttccg ccttagggag
241 gtggcggcca gggatgagga ggcccctaag caagtgcgga atggagccgg ggggcggaga
301 tgccagcctc actttgcatg gtctccagaa ccgctcccac ggcaagataa agctgcgaaa
361 gagaaagtct accttgtact tcaacaccca ggagaagagc gccaggcgcc gcggggatct
421 tcttggagaa aatatttatc tgctcttgtt taccttagct ttacgaatat taaactgctt
481 tttagtgcag acaagttttg ttccagatga atactggcag tctcttgaag tttcacatca
541 catggttttc aattatggtt atttgacttg ggaatggaca gagagactga ggagttacac
601 ttatccctta atctttgcaa gcatttacaa gattcttcat cttttaggga aagatagtgt
661 tcagttgctg atttggattc ctagacttgc ccaagcactt ctgtctgctg tagcagatgt
721 gagactttac tcattaatga agcaactaga aaatcaggaa gtggcaagat gggtgttttt
781 ttgccagttg tgctcctggt tcacatggta ttgctgtacc agaaccctta caaacaccat
841 ggaaactgtt ctcactataa ttgctctttt ctactatcct ttggaaggtt caaagtctat
901 gaacagtgtc aaatactcat ccctggtggc acttgccttc ataattcgtc ccacagctgt
961 cattctgtgg acacctttgc tcttcagaca tttctgtcaa gaaccaagaa agcttgatct
1021 tattctacat cattttttac ctgtaggctt tgttactttg agtttgtctc tgatgattga
1081 tcgtattttt tttggccaat ggactctggt tcaatttaat tttttgaaat ttaacgtgct
1141 gcagaacttg ggaacatttt atggttctca tccatggcac tggtacttca gtcaaggatt
1201 tccagttatc ttgggtactc acttaccctt ctttattcat ggctgctatc tagcaccaaa
1261 gagataccgg atacttttgg tgactgtgct gtggacactg cttgtttata gcatgttgag
1321 ccacaaagaa ttcaggttta tttatccagt tttaccattc tgtatggtgt tctgtggata
1381 ctcattaacc cacctgaaaa catggaagaa accagctcta agtttcctgt ttttatcaaa
1441 tttgttcctc gccctttata ctggtttagt tcatcaacga ggtactcttg atgtcatgag
1501 tcatattcaa aaagtttgtt acaacaatcc caataaatct tcagcttcaa tatttataat
1561 gatgccttgc cactctactc cttattacag ccatgttcac tgcccacttc ccatgagatt
1621 tctccagtgc ccgccagacc tgactggaaa aagtcattat cttgatgaag cagatgtatt
1681 ttacctaaat cccttaaact ggtcacatag agagtttcat gatgatgcat cattgcctac
1741 tcacttgatc accttcagca ttttggaaga ggaaataagt gctttcctaa tttcaagcaa
1801 ttataaaaga actgctgttt tcttccacac tcacttgcca gagggtcgaa ttggaagtca
1861 catatatgtc tatgaacgga agttaaaagg gaaattcaac atgaagatga aattctgaac
1921 tttcctagat aaattaacat tgctgggtgg aaatattcag atgctgctta aatacttcgg
1981 taaacactgg gtaagattca tggaacttag aaaaaagctg tatgaactgc tttaccaaat
2041 atcactactg aggaaatgta taaaatacca catggtataa aattacatgt taatacaatg
2101 ccagatttta aataaagacc tttagttttc ctcaaaaaaa aaaaaaaaaa a
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