LOCUS BC017482 1792 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens hippocalcin-like 1, mRNA (cDNA clone MGC:15798 IMAGE:3504942), complete cds. ACCESSION BC017482 VERSION BC017482.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1792) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1792) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 23 Row: c Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19913440. FEATURES Location/Qualifiers source 1..1792 /db_xref="H-InvDB:HIT000038029" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15798 IMAGE:3504942" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1792 /gene="HPCAL1" /gene_synonym="BDR1" /gene_synonym="HLP2" /gene_synonym="VILIP-3" /db_xref="GeneID:3241" /db_xref="HGNC:HGNC:5145" /db_xref="MIM:600207" CDS 375..956 /gene="HPCAL1" /gene_synonym="BDR1" /gene_synonym="HLP2" /gene_synonym="VILIP-3" /codon_start=1 /product="hippocalcin-like 1" /protein_id="AAH17482.1" /db_xref="GeneID:3241" /db_xref="HGNC:HGNC:5145" /db_xref="MIM:600207" /translation="MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLT VDEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLK WAFSMYDLDGNGYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNN DGKLSLEEFIRGAKSDPSIVRLLQCDPSSASQF" BASE COUNT 357 a 555 c 528 g 352 t ORIGIN 1 cggcggcggc gggcagcgga cgggcggact gacgggcgcc tccaccttgc tccctccctg 61 gctgccggct tccttttgtc tttctgggcg gcgatgagcg cagggccggc gcagcagctg 121 cgggcgcacg gaggcccgcg ctgctagtca ctcctcccgg cctcggcgcg cttgtcccgg 181 gcagcggccc gggcccgctg cagccgccgc cggcgccgaa cttgggctcg ggaagccggc 241 ggaccgcgtc ctgcgccgga gcaggggcat ggtctagtgg cccagtcagg acgcggaaac 301 actccctgga ggttctgacc cactccctct cagcctccgc ctggtctctg gtgtagtcgc 361 cgccgccagc cgccatgggc aaacagaaca gcaagctgcg gcccgaggtg ctgcaggacc 421 tgcgggagaa cacggagttc accgaccacg agctgcagga gtggtacaag ggcttcctca 481 aggactgccc caccggccac ctgaccgtgg acgagttcaa gaagatctac gccaacttct 541 tcccctacgg cgacgcttcc aagttcgccg agcacgtctt ccgcaccttc gacaccaacg 601 gcgacggcac catcgacttc cgggagttca tcattgcgct gagcgtgacc tcgcggggca 661 agctggagca gaagctcaag tgggccttca gcatgtacga cctggacggc aacggctaca 721 tcagccgcag cgagatgctg gagatcgtgc aggccatcta caagatggtg tcgtctgtga 781 tgaagatgcc ggaggatgag tccaccccgg agaagcgcac agacaagatc ttcaggcaga 841 tggacaccaa caatgacggc aaactgtcct tggaagaatt catcagaggt gccaagagcg 901 acccctccat cgtccgcctg ctgcagtgcg accccagcag tgccagtcag ttctgagcga 961 gcggcccctg gacagttgca gagaaacaca ggcttgtcgt gccgtttaag ctttgcttgc 1021 aagagtggat gccccgcaat cgttcctgct ctcccgggcc ccgggcctgg ggcatgcgtt 1081 gcacctgccc ggcccggtgg ctgcgcctcc ctcctccacc tgaccaacgc gacattcctc 1141 ccctcacgcc tggcccggtc ccttccaggg caactcccag ggatgtggtg acatgcaggg 1201 ttcaagtgtt cttggttcca ggcacctccc ggctcacggg gagctcagag gtccatgccg 1261 aggagaccag gcaggacctc ccgaggctgc gccccggccg gcccatgcgt tttgtgatcc 1321 caagtgactc tgtgggaagg gtggggacga ggcgtcggga gggtatacag ggagcccctc 1381 ccgtgcatgg ctgccccccc gttcattttc tccaccacag ccgcttgcac gtatagatac 1441 tgtggtcccc tttcttttaa tatataaatt atgtatggtg aagtggagtg tattgtgtag 1501 gtcccgtatt taatgcctct gactgccttt gaagcgcagc cctctgtggc ccgcagcccc 1561 ctgagcctgg ctgttgtgtg gtatttatgc tctctttgtc tgcctgtttc taaggaaatg 1621 catgtgtgcc ctgagccgtg atgatcctcc catccgtgtt gtgagcacag gcatttgtgt 1681 ctggtctgtc ctccctgttg attggtctgg catttccggt attaaaatga taaaataaat 1741 ggcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //