LOCUS BC017411 1538 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens zinc finger and SCAN domain containing 18, mRNA (cDNA
clone IMAGE:4618419), partial cds.
ACCESSION BC017411
VERSION BC017411.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1538)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1538)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 38 Row: e Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1538
/db_xref="H-InvDB:HIT000089278"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4618419"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1538
/gene="ZSCAN18"
/db_xref="GeneID:65982"
/db_xref="HGNC:HGNC:21037"
CDS <1..510
/gene="ZSCAN18"
/codon_start=1
/product="ZSCAN18 protein"
/protein_id="AAH17411.1"
/db_xref="GeneID:65982"
/db_xref="HGNC:HGNC:21037"
/translation="GQQEEPETIPERTPADLEFSRLRFREFVYQEAAGPHQTLARLHE
LCRQWLMPEACSKEQMLELLVLEQFLGILPDKVRPWVVAQYPESCKKAASLVEGLADV
LEEPGMLLGSPAGSSSILSDGVYERHMDPLLLPGELASPSQALGAGEIPAPSETRECP
ASLAASAGP"
BASE COUNT 346 a 405 c 448 g 339 t
ORIGIN
1 gggcagcagg aagaacccga gaccatccct gagaggaccc ctgctgacct ggagttctcc
61 cgcctgcgtt tccgggaatt tgtctaccag gaggctgccg ggccccacca gaccctggcc
121 cggctgcatg agctgtgccg ccagtggctg atgcctgagg cgtgctccaa ggagcagatg
181 ctggagctgc tggtgctgga gcagttcctg ggcatcctgc ctgataaggt ccggccctgg
241 gtggtggcac agtaccctga gagctgcaag aaggcagcct ccctggtgga gggcctcgct
301 gatgtcctgg aagagccagg gatgctgctg ggctcccctg cgggctcatc ctcaattctt
361 agcgatggag tgtacgagag gcacatggac cctctgctgc taccaggcga gctcgcgagc
421 cccagccagg cccttggagc tggggagatc ccggcacctt ctgagacacg tgagtgccca
481 gctagcctgg cagcctctgc tgggccttag gtggggtgtt gggcagaggc ctgtggttgg
541 gagagggcag aagggcagcc agggagtcag gggctccatg gtccatgcta tcattgggac
601 ttcctcctgt agtttctctg aatgttagac attgtttatt aaattagtct tcagagatta
661 tgcagatcat ccatacttac cacaaatagt gaagaaacat caatacataa agaaaagaat
721 ctcccaaccc ccgaccatga accctctgaa aataaagggt ctcgagtgtc ctgatgcacg
781 tcccctcatg tctccctgca catcacacat gcataatcag ggcctggggt cgggctctgt
841 gtgtgtggtg tgctgtgtct gagtgcttgc tgttcgaggg gtgggtcccc caggctgtgg
901 ttgggtctgg ttctttagtt gcccagcatc gcgtgctcag cccatcccca tcctagaggt
961 gggctctctg ccccttggag tgaagctgcc ctgacacctc ctgacttgtg tgcccatatg
1021 tgaggctctg ggcactgtgg gtggactcct caggaccact gggcaagtgg tgtgtgagtt
1081 tgacatttca cataaaatag aaacttccat gtggttttcc agaagttttg tggctgttca
1141 ttaccagcac ggaaggtgcc cactggcctg gatacagccc agcactatgt ggtgttgctt
1201 tttaggattt ccacgaaggc caggcacagt gcctcatgcc tgtaatcgca gcactttggg
1261 aagccaaggc gggcagatca cttgagcccg ggcattcgag accagcctgg gcaacatagg
1321 gagaccccat ctctacaaaa aatacaaaaa ttagccgggt ccgcactttt agtcccagct
1381 acttgggagg ctgaggtggg aggattgctt gagtccagga ggtggaggtt gcagtgagcc
1441 aagatcatgc cactgcactc cagcctaggt gacagagcaa gaccctgtct ttaaaaaaca
1501 aacaaaccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//