LOCUS BC016914 2073 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens zinc finger, CCHC domain containing 4, mRNA (cDNA
clone IMAGE:4423672), complete cds.
ACCESSION BC016914
VERSION BC016914.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2073)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2073)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 27 Row: k Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction, Similarity but not identity to protein
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2073
/db_xref="H-InvDB:HIT000037744"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4423672"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_89"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2073
/gene="ZCCHC4"
/gene_synonym="HSPC052"
/db_xref="GeneID:29063"
/db_xref="HGNC:HGNC:22917"
CDS 88..705
/gene="ZCCHC4"
/gene_synonym="HSPC052"
/codon_start=1
/product="ZCCHC4 protein"
/protein_id="AAH16914.1"
/db_xref="GeneID:29063"
/db_xref="HGNC:HGNC:22917"
/translation="MEVVLPLDPAVPAPLCPHGPTLLFVKVTQGKEETRRFYACSACR
DRKDCNFFQWEDEKLSGARLAAREAHNRRCQPPLSRTQCVERYLKFIELPLTQRKFCQ
TCQQLLLPDDWGQHSEHQVLGNVSITQLRRPSQLLYPLENKKTNAQYLFADRSCQFLV
DLLSALGFRRVLCVGTPRLHELIKLTASGDKKSNIKSLLLDIDFR"
BASE COUNT 649 a 367 c 454 g 603 t
ORIGIN
1 gacggcggcg ggaagatggc ggcctccagg aatgggtttg aagccgtgga ggcagagggc
61 agcgcagggt gccggggaag ctcgggaatg gaggtggtgc ttcctttgga tcctgccgtc
121 cccgccccgc tgtgccctca cggacccact cttctgtttg taaaggtgac ccaagggaaa
181 gaagaaactc ggaggtttta tgcctgttca gcctgtagag atagaaaaga ctgtaatttt
241 tttcagtggg aagatgaaaa gttgtcagga gctagacttg ctgcccgaga agctcataac
301 cgaagatgtc agcctcccct gtcccgaacg cagtgtgtgg aaaggtactt gaagtttatt
361 gagttgccct tgactcagag aaagttttgt caaacatgtc agcagttgtt gttaccagat
421 gactgggggc aacatagtga gcatcaggtt ctgggtaatg tgtccattac ccagttaaga
481 aggcccagtc aactccttta tccactggaa aacaagaaga caaatgccca gtatctgttt
541 gctgatcgga gctgtcagtt cttggtagac ttactttctg ccctcggatt cagaagagta
601 ctgtgtgttg gaacaccaag gttgcatgag ctgatcaagt tgacagcatc aggtgacaag
661 aagtctaaca ttaaaagcct tttattggat attgattttc ggtagattat gataatcatg
721 cactttataa acacggaaag acaggtcgaa aacagtctcc cgtgcgtatt ttcaccaaca
781 ttccgcccaa caaaataatc cttcctactg aagaagggta cagattttgc tctccgtgtc
841 aacggtatgt ttctctagag aatcaacact gtgagcactg taattcttgc acatccaagg
901 atggcaggaa atggaaccat tgctttctct gtaaaaagtg tgtaaagcct tcctggatcc
961 actgtagcat ctgcaatcac tgtgctgttc cagatcattc ttgtgagggc cccaaacatg
1021 gctgctttat ttgtggtgaa ctggatcata aacgcagtac ttgtcctaac attgctacat
1081 ctaagagagc taacaagtca gtcgaatact ttactagaaa aatgtattcc atctgtgttt
1141 tatacaggat aatccacaaa agcatgcaac attcagagga tcttgaagtg ccaagttaat
1201 tgtcactttc actattaagt actggctgca tagatggatg gagggaggag aggaagatga
1261 ttcaaagagc ttgctttcaa agagcttaca gttctacagc ttagagatga aaataaccaa
1321 aatatgaggt agaaagtggt taattttacc tctccttggc tttacgtctc atgtgtaaag
1381 ttataggggg tgacagttca tgctttattg aaggacatga tatttacgtc aggctttgag
1441 ggacagatca gatatagaca catgatggca ggaaaggctg gagaaggcat ttcagattga
1501 atagcaagta attccacagt aggaaaattg tgagaaagct atttcttttt atcaaatttt
1561 aagaaaaata tttagacatg cttaatgctt aaatatttga aatttttatt actttttttc
1621 ctgtgattat tttcacatct ctcaccaata tttgattgga gctatggatt acaactcaga
1681 gtatggggat acctatgaca atagcttatt tagaagaggc actgcttctg gaatagttat
1741 ccccaaaaca aaacaaaaag agaaaaacat tgctatttta accgagctaa tttgaatgat
1801 tatacttttt tcctaactaa aagggatgat agtgattaag tcctcttcct ttattgctaa
1861 gaaaactaat gttacacagt tattaattgg agattaccag acagctaaat ttgacattat
1921 atgaaattat atgacattat atgaaaattc agattgggct accatgtgac tatgacttgt
1981 aatttaaaaa aattgatttg tgttagaaat atctgatagt ttaataatta tttatggtaa
2041 tattaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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